myRT

myRT report for GCA_900180575.1_14936_3_87

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Seq: FXMX01000010.1 (151837 bp)
Overview 1 RT 1: 112824-119692 bp Neighborhood of RT #1 [112824, 119694] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112824-113552 bp Feature: domain Description: FimC Location: 112872-113535 bp Feature: domain Description: FimC Location: 1 1 2872-1 1 3535 bp Feature: gene Location: 113584-116193 bp Feature: domain Description: FimD Location: 113641-116182 bp Feature: domain Description: FimD Location: 1 1 3641 -1 1 61 82 bp Feature: gene Location: 116193-118271 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116601-117045 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6601 -1 1 7045 bp Feature: gene Location: 118328-118768 bp Feature: domain Description: Integrase_1 Location: 118334-118550 bp Feature: domain Description: Integrase_1 Location: 1 1 8334-1 1 8550 bp Feature: gene Location: 119029-119694 bp Feature: domain Description: INT_P4_C Location: 119134-119692 bp Feature: domain Description: INT_P4_C Location: 1 1 91 34-1 1 9692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXMX01000035.1 (31317 bp)
Overview 1 RT 1: 12954-17037 bp Neighborhood of RT #1 [12954, 17174] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 12954-13385 bp Feature: domain Description: PRK10276 Location: 13005-13368 bp Feature: domain Description: PRK102 76 Location: 13005-13368 bp Feature: gene Location: 13509-13742 bp Feature: gene Location: 13793-15280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14198-14888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14198-14888 bp Feature: gene Location: 15526-16500 bp Feature: domain Description: StbA Location: 15532-16477 bp Feature: domain Description: StbA Location: 15532 -16477 bp Feature: gene Location: 16503-17174 bp Feature: domain Description: Plasmid_stab_B Location: 16518-16725 bp Feature: domain Description: Plasmid_stab_B Location: 16518-1672 5 bp Feature: domain Description: Plasmid_stab_B Location: 16830-17037 bp Feature: domain Description: Plasmid_stab_B Location: 16830-17037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXMX01000055.1 (6192 bp)
Overview 1 RT 1: 59-2360 bp Neighborhood of RT #1 [59, 2374] RVT-GII PRK10276 Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1552-1719 bp Feature: gene Location: 1949-2374 bp Feature: domain Description: PRK10276 Location: 1952-2360 bp Feature: domain Description: PRK10276 Location: 1952-23 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)