myRT

myRT report for GCA_900180585.1_14936_2_79

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Seq: FXML01000034.1 (9808 bp)
Overview 1 RT 1: 2544-6392 bp Neighborhood of RT #1 [2544, 6392] HHA RVT-GII INT_Cre_C Feature: gene Location: 2544-2795 bp Feature: domain Description: HHA Location: 2592-2775 bp Feature: domain Description: HHA Location: 2592-2775 bp Feature: gene Location: 3090-3302 bp Feature: gene Location: 3377-4666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3704-4235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3704-4235 bp Feature: gene Location: 4873-6009 bp Feature: domain Description: INT_Cre_C Location: 5296-5950 bp Feature: domain Description: INT_Cre_C Location: 5296-5950 bp Feature: gene Location: 6075-6392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: FXML01000020.1 (25687 bp)
Overview 1 RT 1: 9413-13603 bp Neighborhood of RT #1 [9413, 13603] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 9413-10084 bp Feature: domain Description: Plasmid_stab_B Location: 9428-9635 bp Feature: domain Description: Plasmid_stab_B Location: 942 8-9635 bp Feature: domain Description: Plasmid_stab_B Location: 9740-9947 bp Feature: domain Description: Plasmid_stab_B Location: 9740-9947 bp Feature: gene Location: 10087-11061 bp Feature: domain Description: StbA Location: 10093-11038 bp Feature: domain Description: StbA Location: 10093-11038 bp Feature: gene Location: 11307-12794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11712-12402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11712 -12 402 bp Feature: gene Location: 12845-13078 bp Feature: gene Location: 13208-13603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXML01000011.1 (143317 bp)
Overview 1 RT 1: 99245-104024 bp Neighborhood of RT #1 [99245, 104024] Macro_Poa1p_like SLATT_5 RVT-UG17 CoiA Feature: gene Location: 99245-100375 bp Feature: domain Description: Macro_Poa1p_like Location: 99248-99662 bp Feature: domain Description: Macro_Poa1p_like Location: 99248-99662 bp Feature: gene Location: 100777-101316 bp Feature: domain Description: SLATT_5 Location: 100783-101296 bp Feature: domain Description: SLATT_5 Location: 100783 -101296 bp Feature: gene Location: 101306-102676 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 101534-102140 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 10153 4-102140 bp Feature: gene Location: 103050-103754 bp Feature: domain Description: CoiA Location: 103107-103437 bp Feature: domain Description: CoiA Location: 103 107-103 43 7 bp Feature: gene Location: 103812-104024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Poa1p_like, SLATT_5 (pfam18160), RVT-UG17, CoiA (pfam06054)