myRT

myRT report for GCA_900180595.1_14893_8_83

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Seq: FXMC01000067.1 (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXMC01000013.1 (151876 bp)
Overview 1 RT 1: 32163-39016 bp Neighborhood of RT #1 [32163, 39033] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32163-32828 bp Feature: domain Description: INT_P4_C Location: 32268-32826 bp Feature: domain Description: INT_P4_C Location: 32 2 68-32 82 6 bp Feature: gene Location: 33089-33529 bp Feature: domain Description: Integrase_1 Location: 33095-33311 bp Feature: domain Description: Integrase_1 Location: 33095-33311 bp Feature: gene Location: 33586-35664 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33994-34438 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33994-34438 bp Feature: gene Location: 35664-38273 bp Feature: domain Description: FimD Location: 35721-38262 bp Feature: domain Description: FimD Location: 3572 1-382 62 bp Feature: gene Location: 38305-39033 bp Feature: domain Description: FimC Location: 38353-39016 bp Feature: domain Description: FimC Location: 38353-39016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXMC01000036.1 (33117 bp)
Overview 1 RT 1: 6601-10804 bp Neighborhood of RT #1 [6601, 10821] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 6601-7272 bp Feature: domain Description: Plasmid_stab_B Location: 6616-6823 bp Feature: domain Description: Plasmid_stab_B Location: 6616-6823 bp Feature: domain Description: Plasmid_stab_B Location: 6928-7135 bp Feature: domain Description: Plasmid_stab_B Location: 6928-713 5 bp Feature: gene Location: 7275-8249 bp Feature: domain Description: StbA Location: 7281-8226 bp Feature: domain Description: StbA Location: 7281-8226 bp Feature: gene Location: 8495-9982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900-9590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900-9590 bp Feature: gene Location: 10033-10266 bp Feature: gene Location: 10390-10821 bp Feature: domain Description: PRK10276 Location: 10441-10804 bp Feature: domain Description: PRK10276 Location: 10441-10804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)