myRT

myRT report for GCA_900180615.1_14936_3_79

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Seq: FXNJ01000012.1 (151867 bp)
Overview 1 RT 1: 112854-119722 bp Neighborhood of RT #1 [112854, 119724] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112854-113582 bp Feature: domain Description: FimC Location: 112902-113565 bp Feature: domain Description: FimC Location: 1 1 2902-1 1 3565 bp Feature: gene Location: 113614-116223 bp Feature: domain Description: FimD Location: 113671-116212 bp Feature: domain Description: FimD Location: 1 1 3671 -1 1 621 2 bp Feature: gene Location: 116223-118301 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116631-117075 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6631 -1 1 7075 bp Feature: gene Location: 118358-118798 bp Feature: domain Description: Integrase_1 Location: 118364-118580 bp Feature: domain Description: Integrase_1 Location: 1 1 8364-1 1 8580 bp Feature: gene Location: 119059-119724 bp Feature: domain Description: INT_P4_C Location: 119164-119722 bp Feature: domain Description: INT_P4_C Location: 1 1 91 64-1 1 9722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXNJ01000035.1 (31286 bp)
Overview 1 RT 1: 14019-18209 bp Neighborhood of RT #1 [14019, 18209] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 14019-14690 bp Feature: domain Description: Plasmid_stab_B Location: 14034-14241 bp Feature: domain Description: Plasmid_stab_B Location: 14034-142 41 bp Feature: domain Description: Plasmid_stab_B Location: 14346-14553 bp Feature: domain Description: Plasmid_stab_B Location: 14346-14553 bp Feature: gene Location: 14693-15667 bp Feature: domain Description: StbA Location: 14699-15644 bp Feature: domain Description: StbA Location: 14699-15644 bp Feature: gene Location: 15913-17400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16318-17008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16318-17008 bp Feature: gene Location: 17451-17684 bp Feature: gene Location: 17814-18209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXNJ01000044.1 (14484 bp)
Overview 1 RT 1: 59-2360 bp Neighborhood of RT #1 [59, 2374] RVT-GII PRK10276 Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1552-1719 bp Feature: gene Location: 1949-2374 bp Feature: domain Description: PRK10276 Location: 1952-2360 bp Feature: domain Description: PRK10276 Location: 1952-23 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)