myRT

myRT report for GCA_900180645.1_14936_3_92

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Seq: FXMH01000037.1 (31011 bp)
Overview 1 RT 1: 14376-18566 bp Neighborhood of RT #1 [14376, 18566] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 14376-15047 bp Feature: domain Description: Plasmid_stab_B Location: 14391-14598 bp Feature: domain Description: Plasmid_stab_B Location: 1 4391 -1 4598 bp Feature: domain Description: Plasmid_stab_B Location: 14703-14910 bp Feature: domain Description: Plasmid_stab_B Location: 1 4703-1 491 0 bp Feature: gene Location: 15050-16024 bp Feature: domain Description: StbA Location: 15056-16001 bp Feature: domain Description: StbA Location: 1 5056-1 6001 bp Feature: gene Location: 16270-17757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16675-17365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6675-1 7365 bp Feature: gene Location: 17808-18041 bp Feature: gene Location: 18171-18566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXMH01000023.1 (92081 bp)
Overview 1 RT 1: 87191-90245 bp Neighborhood of RT #1 [87191, 90245] RVT-GII Feature: gene Location: 87191-87337 bp Feature: gene Location: 87340-87636 bp Feature: gene Location: 87790-89277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88195-88885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88195-88885 bp Feature: gene Location: 89511-89741 bp Feature: gene Location: 90075-90245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXMH01000015.1 (151851 bp)
Overview 1 RT 1: 112825-119693 bp Neighborhood of RT #1 [112825, 119695] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112825-113553 bp Feature: domain Description: FimC Location: 112873-113536 bp Feature: domain Description: FimC Location: 112873 -113 53 6 bp Feature: gene Location: 113585-116194 bp Feature: domain Description: FimD Location: 113642-116183 bp Feature: domain Description: FimD Location: 113 642-116183 bp Feature: gene Location: 116194-118272 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116602-117046 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116602-117046 bp Feature: gene Location: 118329-118769 bp Feature: domain Description: Integrase_1 Location: 118335-118551 bp Feature: domain Description: Integrase_1 Location: 1183 3 5-118551 bp Feature: gene Location: 119030-119695 bp Feature: domain Description: INT_P4_C Location: 119135-119693 bp Feature: domain Description: INT_P4_C Location: 11913 5-119693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)