myRT

myRT report for GCA_900180665.1_14893_8_84

Download annotations/find similar RTs

Seq: FXNE01000030.1 (37952 bp)
Overview 1 RT 1: 2027-5615 bp Neighborhood of RT #1 [2027, 5680] Tra5 RVT-GII GIIM PHA02517 Feature: gene Location: 2027-2716 bp Feature: domain Description: Tra5 Location: 2132-2558 bp Feature: domain Description: Tra5 Location: 21 32-2558 bp Feature: gene Location: 2868-3053 bp Feature: gene Location: 3140-4663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3413-4145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 3-41 45 bp Feature: domain Description: GIIM Note: maturase Location: 4220-4418 bp Feature: domain Description: GIIM Note: maturase Location: 4220-441 8 bp Feature: gene Location: 4617-5042 bp Feature: gene Location: 5255-5680 bp Feature: domain Description: PHA02517 Location: 5279-5615 bp Feature: domain Description: PHA0251 7 Location: 5279-561 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: FXNE01000008.1 (273484 bp)
Overview 1 RT 1: 651-7504 bp Neighborhood of RT #1 [651, 7521] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 651-1316 bp Feature: domain Description: INT_P4_C Location: 756-1314 bp Feature: domain Description: INT_P4_C Location: 756-1314 bp Feature: gene Location: 1577-2017 bp Feature: domain Description: Integrase_1 Location: 1583-1799 bp Feature: domain Description: Integrase_1 Location: 1583-1799 bp Feature: gene Location: 2074-4152 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2482-2926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 482 -2 92 6 bp Feature: gene Location: 4152-6761 bp Feature: domain Description: FimD Location: 4209-6750 bp Feature: domain Description: FimD Location: 42 09-6750 bp Feature: gene Location: 6793-7521 bp Feature: domain Description: FimC Location: 6826-7504 bp Feature: domain Description: FimC Location: 682 6-7504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXNE01000033.1 (27749 bp)
Overview 1 RT 1: 3215-6509 bp Neighborhood of RT #1 [3215, 6523] RVT-GII PRK10276 Feature: gene Location: 3215-3430 bp Feature: gene Location: 3697-3927 bp Feature: gene Location: 4161-5696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4566-5304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4566-53 04 bp Feature: gene Location: 5747-5980 bp Feature: gene Location: 6098-6523 bp Feature: domain Description: PRK10276 Location: 6101-6509 bp Feature: domain Description: PRK10276 Location: 6101-6509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)