myRT

myRT report for GCA_900180675.1_14893_8_75

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Seq: FXMG01000042.1 (12632 bp)
Overview 1 RT 1: 6090-9298 bp Neighborhood of RT #1 [6090, 9298] PRK10276 RVT-GII Feature: gene Location: 6090-6515 bp Feature: domain Description: PRK10276 Location: 6093-6501 bp Feature: domain Description: PRK1 0276 Location: 6093-6501 bp Feature: gene Location: 6633-6866 bp Feature: gene Location: 6917-8452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7322-8060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7322-8060 bp Feature: gene Location: 8686-8916 bp Feature: gene Location: 8975-9298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FXMG01000002.1 (392381 bp)
Overview 1 RT 1: 266053-272921 bp Neighborhood of RT #1 [266053, 272923] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 266053-266781 bp Feature: domain Description: FimC Location: 266086-266764 bp Feature: domain Description: FimC Location: 2 66086-2 66764 bp Feature: gene Location: 266813-269422 bp Feature: domain Description: FimD Location: 266870-269411 bp Feature: domain Description: FimD Location: 2 66870-2 69411 bp Feature: gene Location: 269422-271500 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269830-270274 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 69830-2 702 74 bp Feature: gene Location: 271557-271997 bp Feature: domain Description: Integrase_1 Location: 271563-271779 bp Feature: domain Description: Integrase_1 Location: 2 71563-2 71779 bp Feature: gene Location: 272258-272923 bp Feature: domain Description: INT_P4_C Location: 272363-272921 bp Feature: domain Description: INT_P4_C Location: 2 72 363-2 72 92 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXMG01000049.1 (5070 bp)
Overview 1 RT 1: 3-2768 bp Neighborhood of RT #1 [3, 2833] RVT-GII GIIM PHA02517 Feature: gene Location: 3-206 bp Feature: gene Location: 293-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566-1298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566-1298 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1571 bp Feature: domain Description: GIIM Note: maturase Location: 13 73 -1571 bp Feature: gene Location: 1770-2195 bp Feature: gene Location: 2408-2833 bp Feature: domain Description: PHA02517 Location: 2432-2768 bp Feature: domain Description: PHA02517 Location: 243 2-2768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)