myRT

myRT report for GCA_900180785.1_14936_3_80

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Seq: FXMY01000012.1 (190045 bp)
Overview 1 RT 1: 86905-91012 bp Neighborhood of RT #1 [86905, 91014] DinI RVT-GII PRK10276 umuC Feature: gene Location: 86905-87147 bp Feature: domain Description: DinI Location: 86956-87136 bp Feature: domain Description: DinI Location: 86956-871 36 bp Feature: gene Location: 87162-87308 bp Feature: gene Location: 87761-89248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88166-88856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 66-88856 bp Feature: gene Location: 89327-89746 bp Feature: domain Description: PRK10276 Location: 89330-89741 bp Feature: domain Description: PRK1 0276 Location: 89330-89741 bp Feature: gene Location: 89749-91014 bp Feature: domain Description: umuC Location: 89752-91012 bp Feature: domain Description: umuC Location: 89752-91 01 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: FXMY01000035.1 (30955 bp)
Overview 1 RT 1: 14681-18871 bp Neighborhood of RT #1 [14681, 18871] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 14681-15352 bp Feature: domain Description: Plasmid_stab_B Location: 14696-14903 bp Feature: domain Description: Plasmid_stab_B Location: 14696-14903 bp Feature: domain Description: Plasmid_stab_B Location: 15008-15215 bp Feature: domain Description: Plasmid_stab_B Location: 15008-152 15 bp Feature: gene Location: 15355-16329 bp Feature: domain Description: StbA Location: 15361-16306 bp Feature: domain Description: StbA Location: 15361-16306 bp Feature: gene Location: 16575-18062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16980-17670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16980-17670 bp Feature: gene Location: 18113-18346 bp Feature: gene Location: 18476-18871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXMY01000014.1 (151845 bp)
Overview 1 RT 1: 32146-38999 bp Neighborhood of RT #1 [32146, 39016] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32146-32811 bp Feature: domain Description: INT_P4_C Location: 32251-32809 bp Feature: domain Description: INT_P4_C Location: 3 2251-3 2809 bp Feature: gene Location: 33072-33512 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: domain Description: Integrase_1 Location: 3 3 078-3 3 294 bp Feature: gene Location: 33569-35647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 977-3 4421 bp Feature: gene Location: 35647-38256 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: domain Description: FimD Location: 3 5704-3 8245 bp Feature: gene Location: 38288-39016 bp Feature: domain Description: FimC Location: 38336-38999 bp Feature: domain Description: FimC Location: 3 83 3 6-3 8999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)