myRT

myRT report for GCA_900180905.1_14936_3_91

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Seq: FXMS01000035.1 (22205 bp)
Overview 1 RT 1: 5931-10121 bp Neighborhood of RT #1 [5931, 10121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5931-6602 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 5946-61 53 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: gene Location: 6605-7579 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: domain Description: StbA Location: 661 1 -7556 bp Feature: gene Location: 7825-9312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: gene Location: 9363-9596 bp Feature: gene Location: 9726-10121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXMS01000002.1 (481757 bp)
Overview 1 RT 1: 99036-102888 bp Neighborhood of RT #1 [99036, 102888] umuC PRK10276 RVT-GII Feature: gene Location: 99036-100301 bp Feature: domain Description: umuC Location: 99039-100299 bp Feature: domain Description: umuC Location: 99039-1002 99 bp Feature: gene Location: 100304-100723 bp Feature: domain Description: PRK10276 Location: 100307-100718 bp Feature: domain Description: PRK102 76 Location: 100307-100718 bp Feature: gene Location: 100802-102286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101204-101894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012 04-101894 bp Feature: gene Location: 102443-102739 bp Feature: gene Location: 102742-102888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FXMS01000012.1 (151856 bp)
Overview 1 RT 1: 32144-38997 bp Neighborhood of RT #1 [32144, 39014] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32144-32809 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: domain Description: INT_P4_C Location: 3 2249-3 2807 bp Feature: gene Location: 33070-33510 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: domain Description: Integrase_1 Location: 3 3 076-3 3 292 bp Feature: gene Location: 33567-35645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-34419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 975-3 4419 bp Feature: gene Location: 35645-38254 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: domain Description: FimD Location: 3 5702-3 8243 bp Feature: gene Location: 38286-39014 bp Feature: domain Description: FimC Location: 38334-38997 bp Feature: domain Description: FimC Location: 3 83 3 4-3 8997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)