myRT

myRT report for GCA_900180925.1_14936_3_89

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Seq: FXMQ01000032.1 (34290 bp)
Overview 1 RT 1: 17023-21213 bp Neighborhood of RT #1 [17023, 21213] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 17023-17694 bp Feature: domain Description: Plasmid_stab_B Location: 17038-17245 bp Feature: domain Description: Plasmid_stab_B Location: 1 7038-1 7245 bp Feature: domain Description: Plasmid_stab_B Location: 17350-17557 bp Feature: domain Description: Plasmid_stab_B Location: 1 7350-1 7557 bp Feature: gene Location: 17697-18671 bp Feature: domain Description: StbA Location: 17703-18648 bp Feature: domain Description: StbA Location: 1 7703-1 8648 bp Feature: gene Location: 18917-20404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19322-20012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9322-2001 2 bp Feature: gene Location: 20455-20688 bp Feature: gene Location: 20818-21213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXMQ01000067.1 (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXMQ01000003.1 (362175 bp)
Overview 1 RT 1: 234071-240939 bp Neighborhood of RT #1 [234071, 240941] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 234071-234799 bp Feature: domain Description: FimC Location: 234119-234782 bp Feature: domain Description: FimC Location: 23 4119-23 4782 bp Feature: gene Location: 234831-237440 bp Feature: domain Description: FimD Location: 234888-237429 bp Feature: domain Description: FimD Location: 23 4888-23 7429 bp Feature: gene Location: 237440-239518 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 237848-238292 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 23 7848-23 8292 bp Feature: gene Location: 239575-240015 bp Feature: domain Description: Integrase_1 Location: 239581-239797 bp Feature: domain Description: Integrase_1 Location: 23 9581-23 9797 bp Feature: gene Location: 240276-240941 bp Feature: domain Description: INT_P4_C Location: 240381-240939 bp Feature: domain Description: INT_P4_C Location: 2403 81-24093 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)