myRT

myRT report for GCA_900180945.1_14893_8_74

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Seq: FXMF01000037.1 (25875 bp)
Overview 1 RT 1: 20218-23426 bp Neighborhood of RT #1 [20218, 23426] PRK10276 RVT-GII Feature: gene Location: 20218-20643 bp Feature: domain Description: PRK10276 Location: 20221-20629 bp Feature: domain Description: PRK1 0276 Location: 20221 -20629 bp Feature: gene Location: 20761-20994 bp Feature: gene Location: 21045-22580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21450-22188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 450-221 88 bp Feature: gene Location: 22814-23044 bp Feature: gene Location: 23103-23426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FXMF01000007.1 (273472 bp)
Overview 1 RT 1: 651-7504 bp Neighborhood of RT #1 [651, 7521] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 651-1316 bp Feature: domain Description: INT_P4_C Location: 756-1314 bp Feature: domain Description: INT_P4_C Location: 756-1314 bp Feature: gene Location: 1577-2017 bp Feature: domain Description: Integrase_1 Location: 1583-1799 bp Feature: domain Description: Integrase_1 Location: 1583-1799 bp Feature: gene Location: 2074-4152 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2482-2926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 482 -2 92 6 bp Feature: gene Location: 4152-6761 bp Feature: domain Description: FimD Location: 4209-6750 bp Feature: domain Description: FimD Location: 42 09-6750 bp Feature: gene Location: 6793-7521 bp Feature: domain Description: FimC Location: 6826-7504 bp Feature: domain Description: FimC Location: 682 6-7504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXMF01000034.1 (29724 bp)
Overview 1 RT 1: 2-2739 bp Neighborhood of RT #1 [2, 2739] RVT-GII GIIM Feature: gene Location: 2-205 bp Feature: gene Location: 292-1815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565-1297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565-1297 bp Feature: domain Description: GIIM Note: maturase Location: 1372-1570 bp Feature: domain Description: GIIM Note: maturase Location: 13 72-1570 bp Feature: gene Location: 2109-2546 bp Feature: gene Location: 2551-2739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)