myRT

myRT report for GCA_900180965.1_14893_8_87

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Seq: FXNB01000007.1 (273443 bp)
Overview 1 RT 1: 651-7504 bp Neighborhood of RT #1 [651, 7521] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 651-1316 bp Feature: domain Description: INT_P4_C Location: 756-1314 bp Feature: domain Description: INT_P4_C Location: 756-1 31 4 bp Feature: gene Location: 1577-2017 bp Feature: domain Description: Integrase_1 Location: 1583-1799 bp Feature: domain Description: Integrase_1 Location: 1 583-1 799 bp Feature: gene Location: 2074-4152 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2482-2926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2482-2926 bp Feature: gene Location: 4152-6761 bp Feature: domain Description: FimD Location: 4209-6750 bp Feature: domain Description: FimD Location: 4209-6750 bp Feature: gene Location: 6793-7521 bp Feature: domain Description: FimC Location: 6826-7504 bp Feature: domain Description: FimC Location: 6826-7504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXNB01000034.1 (27415 bp)
Overview 1 RT 1: 1-2757 bp Neighborhood of RT #1 [1, 2822] RVT-GII GIIM PHA02517 Feature: gene Location: 1-195 bp Feature: gene Location: 282-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-12 87 bp Feature: domain Description: GIIM Note: maturase Location: 1362-1560 bp Feature: domain Description: GIIM Note: maturase Location: 1362 -1560 bp Feature: gene Location: 1759-2184 bp Feature: gene Location: 2397-2822 bp Feature: domain Description: PHA02517 Location: 2421-2757 bp Feature: domain Description: PHA02 517 Location: 2 42 1-2 757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: FXNB01000043.1 (10469 bp)
Overview 1 RT 1: 6065-9273 bp Neighborhood of RT #1 [6065, 9273] PRK10276 RVT-GII Feature: gene Location: 6065-6490 bp Feature: domain Description: PRK10276 Location: 6068-6476 bp Feature: domain Description: PRK10276 Location: 6068-6476 bp Feature: gene Location: 6608-6841 bp Feature: gene Location: 6892-8427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7297-8035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7297-803 5 bp Feature: gene Location: 8661-8891 bp Feature: gene Location: 8950-9273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII