myRT

myRT report for GCA_900181085.1_14936_2_3

Download annotations/find similar RTs

Seq: FXOE01000062.1 (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXOE01000015.1 (151840 bp)
Overview 1 RT 1: 32148-39001 bp Neighborhood of RT #1 [32148, 39018] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32148-32813 bp Feature: domain Description: INT_P4_C Location: 32253-32811 bp Feature: domain Description: INT_P4_C Location: 32 2 53-32 811 bp Feature: gene Location: 33074-33514 bp Feature: domain Description: Integrase_1 Location: 33080-33296 bp Feature: domain Description: Integrase_1 Location: 33080-332 96 bp Feature: gene Location: 33571-35649 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33979-34423 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33979-3442 3 bp Feature: gene Location: 35649-38258 bp Feature: domain Description: FimD Location: 35706-38247 bp Feature: domain Description: FimD Location: 35706-382 47 bp Feature: gene Location: 38290-39018 bp Feature: domain Description: FimC Location: 38338-39001 bp Feature: domain Description: FimC Location: 38338-39001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXOE01000036.1 (15891 bp)
Overview 1 RT 1: 10428-14735 bp Neighborhood of RT #1 [10428, 14743] InsE PHA02517 RVT-GII GIIM PHA02517 APH Feature: gene Location: 10428-10712 bp Feature: domain Description: InsE Location: 10440-10701 bp Feature: domain Description: InsE Location: 10440-10701 bp Feature: gene Location: 10760-11179 bp Feature: domain Description: PHA02517 Location: 10775-11114 bp Feature: domain Description: PHA02517 Location: 10775-11114 bp Feature: gene Location: 11771-13294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12044-12776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12044-12776 bp Feature: domain Description: GIIM Note: maturase Location: 12851-13049 bp Feature: domain Description: GIIM Note: maturase Location: 12851-13 049 bp Feature: gene Location: 13444-13833 bp Feature: domain Description: PHA02517 Location: 13450-13825 bp Feature: domain Description: PHA02517 Location: 13 450-13 825 bp Feature: gene Location: 13754-14743 bp Feature: domain Description: APH Location: 13982-14735 bp Feature: domain Description: APH Location: 13 982-1473 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), APH (pfam01636)