myRT

myRT report for GCA_900181095.1_14936_2_4

Download annotations/find similar RTs

Seq: FXOR01000019.1 (41693 bp)
Overview 1 RT 1: 9280-13016 bp Neighborhood of RT #1 [9280, 13024] PHA02517 COG3547 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9280-9522 bp Feature: domain Description: PHA02517 Location: 9283-9511 bp Feature: domain Description: PHA0251 7 Location: 9283-951 1 bp Feature: gene Location: 9605-10681 bp Feature: domain Description: COG3547 Location: 9644-10568 bp Feature: domain Description: COG3547 Location: 9644-1 0568 bp Feature: gene Location: 11223-11978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11331-11460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 331 -1 1 460 bp Feature: domain Description: GIIM Note: maturase Location: 11574-11754 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 574-1 1 754 bp Feature: gene Location: 12279-12689 bp Feature: domain Description: PHA02517 Location: 12285-12624 bp Feature: domain Description: PHA0251 7 Location: 1 2285-1 2624 bp Feature: gene Location: 12746-13024 bp Feature: domain Description: InsE Location: 12758-13016 bp Feature: domain Description: InsE Location: 1 2758-1 301 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: FXOR01000009.1 (321544 bp)
Overview 1 RT 1: 267407-272841 bp Neighborhood of RT #1 [267407, 272841] PapC_C RVT-UG4 EAL Feature: gene Location: 267407-267652 bp Feature: gene Location: 268740-269024 bp Feature: domain Description: PapC_C Location: 268758-268956 bp Feature: domain Description: PapC_C Location: 2 68758-2 68956 bp Feature: gene Location: 269024-271054 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269432-269876 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 69432 -2 69876 bp Feature: gene Location: 271691-272512 bp Feature: domain Description: EAL Location: 272375-272489 bp Feature: domain Description: EAL Location: 2 72 375-2 72 489 bp Feature: gene Location: 272635-272841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PapC_C (pfam13953), RVT-UG4, EAL (smart00052)

Seq: FXOR01000072.1 (2027 bp)
Overview 1 RT 1: 100-2025 bp Neighborhood of RT #1 [100, 2025] RVT-GII Feature: gene Location: 100-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-1195 bp Feature: gene Location: 1741-2025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII