myRT

myRT report for GCA_900181115.1_14936_2_2

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Seq: FXOH01000012.1 (151852 bp)
Overview 1 RT 1: 112828-119696 bp Neighborhood of RT #1 [112828, 119698] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112828-113556 bp Feature: domain Description: FimC Location: 112876-113539 bp Feature: domain Description: FimC Location: 1 1 2876-1 1 3539 bp Feature: gene Location: 113588-116197 bp Feature: domain Description: FimD Location: 113645-116186 bp Feature: domain Description: FimD Location: 1 1 3645-1 1 61 86 bp Feature: gene Location: 116197-118275 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116605-117049 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6605-1 1 7049 bp Feature: gene Location: 118332-118772 bp Feature: domain Description: Integrase_1 Location: 118338-118554 bp Feature: domain Description: Integrase_1 Location: 1 1 8338-1 1 8554 bp Feature: gene Location: 119033-119698 bp Feature: domain Description: INT_P4_C Location: 119138-119696 bp Feature: domain Description: INT_P4_C Location: 1 1 91 38-1 1 9696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXOH01000035.1 (24273 bp)
Overview 1 RT 1: 1600-6134 bp 2 RT 2: 14731-19038 bp Neighborhood of RT #1 [1600, 6142] RVT-GII PRK10276 umuC Neighborhood of RT #2 [14731, 19046] InsE PHA02517 RVT-GII GIIM PHA02517 APH Feature: gene Location: 1600-1821 bp Feature: gene Location: 2083-2313 bp Feature: gene Location: 2547-4034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 952 -3642 bp Feature: gene Location: 4059-4871 bp Feature: domain Description: PRK10276 Location: 4491-4854 bp Feature: domain Description: PRK102 76 Location: 4491-4854 bp Feature: gene Location: 4871-6142 bp Feature: domain Description: umuC Location: 4874-6134 bp Feature: domain Description: umuC Location: 4874-6134 bp Feature: gene Location: 14731-15015 bp Feature: domain Description: InsE Location: 14743-15004 bp Feature: domain Description: InsE Location: 14743-15004 bp Feature: gene Location: 15063-15482 bp Feature: domain Description: PHA02517 Location: 15078-15417 bp Feature: domain Description: PHA02 517 Location: 15078-15417 bp Feature: gene Location: 16074-17597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16347-17079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16347-17079 bp Feature: domain Description: GIIM Note: maturase Location: 17154-17352 bp Feature: domain Description: GIIM Note: maturase Location: 17154-17352 bp Feature: gene Location: 17807-18136 bp Feature: domain Description: PHA02517 Location: 17810-18128 bp Feature: domain Description: PHA02 517 Location: 17810-1812 8 bp Feature: gene Location: 18057-19046 bp Feature: domain Description: APH Location: 18285-19038 bp Feature: domain Description: APH Location: 182 85-19038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), APH (pfam01636)