myRT

myRT report for GCA_900181165.1_14936_2_6

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Seq: FXOS01000055.1 (2193 bp)
Overview 1 RT 1: 347-2172 bp Neighborhood of RT #1 [347, 2172] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Feature: gene Location: 1903-2172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXOS01000014.1 (151848 bp)
Overview 1 RT 1: 112835-119703 bp Neighborhood of RT #1 [112835, 119705] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112835-113563 bp Feature: domain Description: FimC Location: 112883-113546 bp Feature: domain Description: FimC Location: 112 883-113546 bp Feature: gene Location: 113595-116204 bp Feature: domain Description: FimD Location: 113652-116193 bp Feature: domain Description: FimD Location: 113652 -116193 bp Feature: gene Location: 116204-118282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116612-117056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116612 -117056 bp Feature: gene Location: 118339-118779 bp Feature: domain Description: Integrase_1 Location: 118345-118561 bp Feature: domain Description: Integrase_1 Location: 118345-118561 bp Feature: gene Location: 119040-119705 bp Feature: domain Description: INT_P4_C Location: 119145-119703 bp Feature: domain Description: INT_P4_C Location: 119145-119703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXOS01000033.1 (19975 bp)
Overview 1 RT 1: 5232-9536 bp Neighborhood of RT #1 [5232, 9547] APH PHA02517 RVT-GII GIIM InsE Feature: gene Location: 5232-6221 bp Feature: domain Description: APH Location: 5460-6213 bp Feature: domain Description: APH Location: 5460-6213 bp Feature: gene Location: 6142-6471 bp Feature: domain Description: PHA02517 Location: 6145-6463 bp Feature: domain Description: PHA02517 Location: 6145-6463 bp Feature: gene Location: 6681-8204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6954-7686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6954-7686 bp Feature: domain Description: GIIM Note: maturase Location: 7761-7959 bp Feature: domain Description: GIIM Note: maturase Location: 7761-7959 bp Feature: gene Location: 8498-8869 bp Feature: gene Location: 9263-9547 bp Feature: domain Description: InsE Location: 9275-9536 bp Feature: domain Description: InsE Location: 9275-953 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)