myRT

myRT report for GCA_900181235.1_14936_2_5

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Seq: FXPE01000047.1 (4151 bp)
Overview 1 RT 1: 290-2839 bp Neighborhood of RT #1 [290, 2839] CspC RVT-Retrons Feature: gene Location: 290-553 bp Feature: gene Location: 762-965 bp Feature: domain Description: CspC Location: 765-960 bp Feature: domain Description: CspC Location: 765-960 bp Feature: gene Location: 970-2109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1114-1669 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 4-1 669 bp Feature: gene Location: 2131-2313 bp Feature: gene Location: 2693-2839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons

Seq: FXPE01000028.1 (16452 bp)
Overview 1 RT 1: 13505-16386 bp Neighborhood of RT #1 [13505, 16386] StbA RVT-GII Feature: gene Location: 13505-14476 bp Feature: domain Description: StbA Location: 13508-14453 bp Feature: domain Description: StbA Location: 13508-14453 bp Feature: gene Location: 14651-14839 bp Feature: gene Location: 14846-16213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15251-15782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 51-15782 bp Feature: gene Location: 16219-16386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII

Seq: FXPE01000008.1 (316972 bp)
Overview 1 RT 1: 32152-39005 bp Neighborhood of RT #1 [32152, 39022] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32152-32817 bp Feature: domain Description: INT_P4_C Location: 32257-32815 bp Feature: domain Description: INT_P4_C Location: 3 2257-3 2815 bp Feature: gene Location: 33078-33518 bp Feature: domain Description: Integrase_1 Location: 33084-33300 bp Feature: domain Description: Integrase_1 Location: 3 3 084-3 3 3 00 bp Feature: gene Location: 33575-35653 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33983-34427 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 983 -3 4427 bp Feature: gene Location: 35653-38262 bp Feature: domain Description: FimD Location: 35710-38251 bp Feature: domain Description: FimD Location: 3 5710-3 8251 bp Feature: gene Location: 38294-39022 bp Feature: domain Description: FimC Location: 38342-39005 bp Feature: domain Description: FimC Location: 3 83 42-3 9005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)