myRT

myRT report for GCA_900181275.1_14936_2_12

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Seq: FXOW01000012.1 (151841 bp)
Overview 1 RT 1: 32144-38997 bp Neighborhood of RT #1 [32144, 39014] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32144-32809 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: gene Location: 33070-33510 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: gene Location: 33567-35645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-34419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-3441 9 bp Feature: gene Location: 35645-38254 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: gene Location: 38286-39014 bp Feature: domain Description: FimC Location: 38334-38997 bp Feature: domain Description: FimC Location: 38334-38997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXOW01000034.1 (30156 bp)
Overview 1 RT 1: 12839-17029 bp Neighborhood of RT #1 [12839, 17029] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 12839-13510 bp Feature: domain Description: Plasmid_stab_B Location: 12854-13061 bp Feature: domain Description: Plasmid_stab_B Location: 12 854-13061 bp Feature: domain Description: Plasmid_stab_B Location: 13166-13373 bp Feature: domain Description: Plasmid_stab_B Location: 13166-13373 bp Feature: gene Location: 13513-14487 bp Feature: domain Description: StbA Location: 13519-14464 bp Feature: domain Description: StbA Location: 13519-14464 bp Feature: gene Location: 14733-16220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15138-15828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15138-1582 8 bp Feature: gene Location: 16271-16504 bp Feature: gene Location: 16634-17029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXOW01000016.1 (112084 bp)
Overview 1 RT 1: 2-4256 bp Neighborhood of RT #1 [2, 4369] DDE_Tnp_IS1 BetT RVT-GII Microcin Feature: gene Location: 2-154 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5-152 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5-152 bp Feature: gene Location: 300-1784 bp Feature: domain Description: BetT Location: 336-1776 bp Feature: domain Description: BetT Location: 3 3 6-1776 bp Feature: gene Location: 1833-3320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2238-2928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223 8-2928 bp Feature: gene Location: 3345-3809 bp Feature: gene Location: 4010-4369 bp Feature: domain Description: Microcin Location: 4157-4256 bp Feature: domain Description: Microcin Location: 4157-4256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, Microcin (pfam03526)