myRT

myRT report for GCA_900181295.1_14936_2_13

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Seq: FXPD01000009.1 (321659 bp)
Overview 1 RT 1: 265793-272979 bp Neighborhood of RT #1 [265793, 272979] FimC FimD RVT-UG4 EAL Feature: gene Location: 265793-266521 bp Feature: domain Description: FimC Location: 265841-266504 bp Feature: domain Description: FimC Location: 265841 -266504 bp Feature: gene Location: 266553-269162 bp Feature: domain Description: FimD Location: 266610-269151 bp Feature: domain Description: FimD Location: 26661 0-2691 51 bp Feature: gene Location: 269162-271192 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269570-270014 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269570-27001 4 bp Feature: gene Location: 271829-272650 bp Feature: domain Description: EAL Location: 272513-272627 bp Feature: domain Description: EAL Location: 27251 3-272627 bp Feature: gene Location: 272773-272979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: FXPD01000022.1 (41660 bp)
Overview 1 RT 1: 28624-31930 bp Neighborhood of RT #1 [28624, 32043] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 28624-28902 bp Feature: domain Description: InsE Location: 28636-28894 bp Feature: domain Description: InsE Location: 2 8636-2 8894 bp Feature: gene Location: 28959-29369 bp Feature: domain Description: PHA02517 Location: 28965-29304 bp Feature: domain Description: PHA02 517 Location: 2 8965-2 9304 bp Feature: gene Location: 29670-30425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29778-29907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9778-2 9907 bp Feature: domain Description: GIIM Note: maturase Location: 30021-30201 bp Feature: domain Description: GIIM Note: maturase Location: 3002 1-302 01 bp Feature: gene Location: 30548-30748 bp Feature: domain Description: PHA02517 Location: 30551-30713 bp Feature: domain Description: PHA02 517 Location: 30551-30713 bp Feature: gene Location: 30967-32043 bp Feature: domain Description: COG3547 Location: 31006-31930 bp Feature: domain Description: COG3547 Location: 31006-31930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )