myRT

myRT report for GCA_900181305.1_14936_2_14

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Seq: FXPG01000012.1 (151846 bp)
Overview 1 RT 1: 112823-119691 bp Neighborhood of RT #1 [112823, 119693] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112823-113551 bp Feature: domain Description: FimC Location: 112871-113534 bp Feature: domain Description: FimC Location: 1 1 2871 -1 1 3534 bp Feature: gene Location: 113583-116192 bp Feature: domain Description: FimD Location: 113640-116181 bp Feature: domain Description: FimD Location: 1 1 3640-1 1 61 81 bp Feature: gene Location: 116192-118270 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116600-117044 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6600-1 1 7044 bp Feature: gene Location: 118327-118767 bp Feature: domain Description: Integrase_1 Location: 118333-118549 bp Feature: domain Description: Integrase_1 Location: 1 1 8333-1 1 8549 bp Feature: gene Location: 119028-119693 bp Feature: domain Description: INT_P4_C Location: 119133-119691 bp Feature: domain Description: INT_P4_C Location: 1 1 91 33-1 1 9691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXPG01000035.1 (27349 bp)
Overview 1 RT 1: 17199-21282 bp Neighborhood of RT #1 [17199, 21419] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 17199-17630 bp Feature: domain Description: PRK10276 Location: 17250-17613 bp Feature: domain Description: PRK102 76 Location: 172 50-17613 bp Feature: gene Location: 17754-17987 bp Feature: gene Location: 18038-19525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18443-19133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18443-19133 bp Feature: gene Location: 19771-20745 bp Feature: domain Description: StbA Location: 19777-20722 bp Feature: domain Description: StbA Location: 19777-2 072 2 bp Feature: gene Location: 20748-21419 bp Feature: domain Description: Plasmid_stab_B Location: 20763-20970 bp Feature: domain Description: Plasmid_stab_B Location: 2 0763-2 0970 bp Feature: domain Description: Plasmid_stab_B Location: 21075-21282 bp Feature: domain Description: Plasmid_stab_B Location: 2 1075-2 12 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXPG01000003.1 (414589 bp)
Overview 1 RT 1: 99038-102890 bp Neighborhood of RT #1 [99038, 102890] umuC PRK10276 RVT-GII Feature: gene Location: 99038-100303 bp Feature: domain Description: umuC Location: 99041-100301 bp Feature: domain Description: umuC Location: 99041-1003 01 bp Feature: gene Location: 100306-100725 bp Feature: domain Description: PRK10276 Location: 100309-100720 bp Feature: domain Description: PRK10276 Location: 1003 09-100720 bp Feature: gene Location: 100804-102288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101206-101896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101206-101896 bp Feature: gene Location: 102445-102741 bp Feature: gene Location: 102744-102890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII