myRT

myRT report for GCA_900181345.1_14936_2_19

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Seq: FXPL01000040.1 (27347 bp)
Overview 1 RT 1: 5931-10121 bp Neighborhood of RT #1 [5931, 10121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5931-6602 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 5946-61 53 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: gene Location: 6605-7579 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: domain Description: StbA Location: 661 1 -7556 bp Feature: gene Location: 7825-9312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: gene Location: 9363-9596 bp Feature: gene Location: 9726-10121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXPL01000011.1 (151868 bp)
Overview 1 RT 1: 112855-119723 bp Neighborhood of RT #1 [112855, 119725] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112855-113583 bp Feature: domain Description: FimC Location: 112903-113566 bp Feature: domain Description: FimC Location: 112 903-113566 bp Feature: gene Location: 113615-116224 bp Feature: domain Description: FimD Location: 113672-116213 bp Feature: domain Description: FimD Location: 113672 -1162 13 bp Feature: gene Location: 116224-118302 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116632-117076 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116632 -117076 bp Feature: gene Location: 118359-118799 bp Feature: domain Description: Integrase_1 Location: 118365-118581 bp Feature: domain Description: Integrase_1 Location: 118365-118581 bp Feature: gene Location: 119060-119725 bp Feature: domain Description: INT_P4_C Location: 119165-119723 bp Feature: domain Description: INT_P4_C Location: 119165-11972 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXPL01000022.1 (90983 bp)
Overview 1 RT 1: 88839-90533 bp Neighborhood of RT #1 [88839, 90925] RVT-GII Feature: gene Location: 88839-88985 bp Feature: gene Location: 88988-89284 bp Feature: gene Location: 89438-90925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89843-90533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89843 -9053 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII