myRT

myRT report for GCA_900181355.1_14936_3_15

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Seq: FXOY01000042.1 (15553 bp)
Overview 1 RT 1: 13241-15103 bp Neighborhood of RT #1 [13241, 15495] HHA RVT-GII Feature: gene Location: 13241-13492 bp Feature: domain Description: HHA Location: 13289-13472 bp Feature: domain Description: HHA Location: 1 3289-1 3472 bp Feature: gene Location: 13582-13983 bp Feature: gene Location: 14008-15495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14413-15103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 441 3-1 51 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII

Seq: FXOY01000013.1 (153598 bp)
Overview 1 RT 1: 33853-40706 bp Neighborhood of RT #1 [33853, 40723] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 33853-34518 bp Feature: domain Description: INT_P4_C Location: 33958-34516 bp Feature: domain Description: INT_P4_C Location: 33958-34516 bp Feature: gene Location: 34779-35219 bp Feature: domain Description: Integrase_1 Location: 34785-35001 bp Feature: domain Description: Integrase_1 Location: 34785-35001 bp Feature: gene Location: 35276-37354 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35684-36128 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35684-3612 8 bp Feature: gene Location: 37354-39963 bp Feature: domain Description: FimD Location: 37411-39952 bp Feature: domain Description: FimD Location: 37411-39952 bp Feature: gene Location: 39995-40723 bp Feature: domain Description: FimC Location: 40043-40706 bp Feature: domain Description: FimC Location: 40043-40706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXOY01000034.1 (27356 bp)
Overview 1 RT 1: 17206-21289 bp Neighborhood of RT #1 [17206, 21426] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 17206-17637 bp Feature: domain Description: PRK10276 Location: 17257-17620 bp Feature: domain Description: PRK10276 Location: 17257-17620 bp Feature: gene Location: 17761-17994 bp Feature: gene Location: 18045-19532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18450-19140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18450-19140 bp Feature: gene Location: 19778-20752 bp Feature: domain Description: StbA Location: 19784-20729 bp Feature: domain Description: StbA Location: 19784-20729 bp Feature: gene Location: 20755-21426 bp Feature: domain Description: Plasmid_stab_B Location: 20770-20977 bp Feature: domain Description: Plasmid_stab_B Location: 20770-20977 bp Feature: domain Description: Plasmid_stab_B Location: 21082-21289 bp Feature: domain Description: Plasmid_stab_B Location: 21082-21289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)