myRT

myRT report for GCA_900181375.1_14936_3_13

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Seq: FXPA01000012.1 (151876 bp)
Overview 1 RT 1: 32146-38999 bp Neighborhood of RT #1 [32146, 39016] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32146-32811 bp Feature: domain Description: INT_P4_C Location: 32251-32809 bp Feature: domain Description: INT_P4_C Location: 32251 -32809 bp Feature: gene Location: 33072-33512 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: gene Location: 33569-35647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: gene Location: 35647-38256 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: gene Location: 38288-39016 bp Feature: domain Description: FimC Location: 38336-38999 bp Feature: domain Description: FimC Location: 38336-38999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXPA01000036.1 (29640 bp)
Overview 1 RT 1: 12467-16657 bp Neighborhood of RT #1 [12467, 16657] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 12467-13138 bp Feature: domain Description: Plasmid_stab_B Location: 12482-12689 bp Feature: domain Description: Plasmid_stab_B Location: 12 482 -12 689 bp Feature: domain Description: Plasmid_stab_B Location: 12794-13001 bp Feature: domain Description: Plasmid_stab_B Location: 12 794-13001 bp Feature: gene Location: 13141-14115 bp Feature: domain Description: StbA Location: 13147-14092 bp Feature: domain Description: StbA Location: 13147-14092 bp Feature: gene Location: 14361-15848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14766-15456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14766-15456 bp Feature: gene Location: 15899-16132 bp Feature: gene Location: 16262-16657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXPA01000087.1 (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII