myRT

myRT report for GCA_900181395.1_14936_3_14

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Seq: FXPN01000034.1 (21680 bp)
Overview 1 RT 1: 5406-9596 bp Neighborhood of RT #1 [5406, 9596] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5406-6077 bp Feature: domain Description: Plasmid_stab_B Location: 5421-5628 bp Feature: domain Description: Plasmid_stab_B Location: 5421 -5628 bp Feature: domain Description: Plasmid_stab_B Location: 5733-5940 bp Feature: domain Description: Plasmid_stab_B Location: 5733-5940 bp Feature: gene Location: 6080-7054 bp Feature: domain Description: StbA Location: 6086-7031 bp Feature: domain Description: StbA Location: 6086-7031 bp Feature: gene Location: 7300-8787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7705-8395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7705-8395 bp Feature: gene Location: 8838-9071 bp Feature: gene Location: 9201-9596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXPN01000014.1 (151854 bp)
Overview 1 RT 1: 112836-119704 bp Neighborhood of RT #1 [112836, 119706] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112836-113564 bp Feature: domain Description: FimC Location: 112884-113547 bp Feature: domain Description: FimC Location: 112 884-113547 bp Feature: gene Location: 113596-116205 bp Feature: domain Description: FimD Location: 113653-116194 bp Feature: domain Description: FimD Location: 113653-116194 bp Feature: gene Location: 116205-118283 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116613-117057 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116613-117057 bp Feature: gene Location: 118340-118780 bp Feature: domain Description: Integrase_1 Location: 118346-118562 bp Feature: domain Description: Integrase_1 Location: 118346-118562 bp Feature: gene Location: 119041-119706 bp Feature: domain Description: INT_P4_C Location: 119146-119704 bp Feature: domain Description: INT_P4_C Location: 119146-119704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXPN01000013.1 (164174 bp)
Overview 1 RT 1: 87142-90833 bp Neighborhood of RT #1 [87142, 90833] RVT-GII INT_Cre_C Feature: gene Location: 87142-87288 bp Feature: gene Location: 87291-87716 bp Feature: gene Location: 87741-89228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88146-88836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88146-8883 6 bp Feature: gene Location: 89314-90450 bp Feature: domain Description: INT_Cre_C Location: 89737-90391 bp Feature: domain Description: INT_Cre_C Location: 8973 7-903 91 bp Feature: gene Location: 90516-90833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Cre_C (cd00799)