myRT

myRT report for GCA_900181405.1_14936_3_21

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Seq: FXPM01000013.1 (151857 bp)
Overview 1 RT 1: 32144-38997 bp Neighborhood of RT #1 [32144, 39014] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32144-32809 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: gene Location: 33070-33510 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: gene Location: 33567-35645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-34419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-3441 9 bp Feature: gene Location: 35645-38254 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: gene Location: 38286-39014 bp Feature: domain Description: FimC Location: 38334-38997 bp Feature: domain Description: FimC Location: 38334-38997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXPM01000034.1 (32134 bp)
Overview 1 RT 1: 13163-17246 bp Neighborhood of RT #1 [13163, 17383] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13163-13594 bp Feature: domain Description: PRK10276 Location: 13214-13577 bp Feature: domain Description: PRK102 76 Location: 132 14-13577 bp Feature: gene Location: 13718-13951 bp Feature: gene Location: 14002-15489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14407-15097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14407-15097 bp Feature: gene Location: 15735-16709 bp Feature: domain Description: StbA Location: 15741-16686 bp Feature: domain Description: StbA Location: 15741-16686 bp Feature: gene Location: 16712-17383 bp Feature: domain Description: Plasmid_stab_B Location: 16727-16934 bp Feature: domain Description: Plasmid_stab_B Location: 1672 7-16934 bp Feature: domain Description: Plasmid_stab_B Location: 17039-17246 bp Feature: domain Description: Plasmid_stab_B Location: 17039-172 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXPM01000035.1 (26633 bp)
Overview 1 RT 1: 20982-24603 bp Neighborhood of RT #1 [20982, 24603] InsQ RVT-GII Feature: gene Location: 20982-21671 bp Feature: domain Description: InsQ Location: 21207-21582 bp Feature: domain Description: InsQ Location: 21207-21582 bp Feature: gene Location: 21907-22290 bp Feature: gene Location: 22315-23802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22720-23410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22720-23 410 bp Feature: gene Location: 24036-24266 bp Feature: gene Location: 24325-24603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII