myRT

myRT report for GCA_900181445.1_14936_2_17

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Seq: FXPQ01000036.1 (27354 bp)
Overview 1 RT 1: 5931-10121 bp Neighborhood of RT #1 [5931, 10121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5931-6602 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 5946-61 53 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: gene Location: 6605-7579 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: domain Description: StbA Location: 661 1 -7556 bp Feature: gene Location: 7825-9312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: gene Location: 9363-9596 bp Feature: gene Location: 9726-10121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXPQ01000011.1 (151872 bp)
Overview 1 RT 1: 112859-119727 bp Neighborhood of RT #1 [112859, 119729] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112859-113587 bp Feature: domain Description: FimC Location: 112907-113570 bp Feature: domain Description: FimC Location: 112 907-113570 bp Feature: gene Location: 113619-116228 bp Feature: domain Description: FimD Location: 113676-116217 bp Feature: domain Description: FimD Location: 113676-1162 17 bp Feature: gene Location: 116228-118306 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116636-117080 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116636-117080 bp Feature: gene Location: 118363-118803 bp Feature: domain Description: Integrase_1 Location: 118369-118585 bp Feature: domain Description: Integrase_1 Location: 118369-118585 bp Feature: gene Location: 119064-119729 bp Feature: domain Description: INT_P4_C Location: 119169-119727 bp Feature: domain Description: INT_P4_C Location: 119169-11972 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXPQ01000020.1 (93634 bp)
Overview 1 RT 1: 1771-4804 bp Neighborhood of RT #1 [1771, 4804] RVT-GII Feature: gene Location: 1771-1992 bp Feature: gene Location: 2254-2484 bp Feature: gene Location: 2718-4205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3123-3813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 123 -3 813 bp Feature: gene Location: 4359-4655 bp Feature: gene Location: 4658-4804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII