myRT

myRT report for GCA_900181475.1_14936_3_23

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Seq: FXPT01000039.1 (27199 bp)
Overview 1 RT 1: 17200-21283 bp Neighborhood of RT #1 [17200, 21420] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 17200-17631 bp Feature: domain Description: PRK10276 Location: 17251-17614 bp Feature: domain Description: PRK1 0276 Location: 1 7251 -1 761 4 bp Feature: gene Location: 17755-17988 bp Feature: gene Location: 18039-19526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18444-19134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8444-1 91 34 bp Feature: gene Location: 19772-20746 bp Feature: domain Description: StbA Location: 19778-20723 bp Feature: domain Description: StbA Location: 1 9778-20723 bp Feature: gene Location: 20749-21420 bp Feature: domain Description: Plasmid_stab_B Location: 20764-20971 bp Feature: domain Description: Plasmid_stab_B Location: 20764-20971 bp Feature: domain Description: Plasmid_stab_B Location: 21076-21283 bp Feature: domain Description: Plasmid_stab_B Location: 21 076-21 283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXPT01000022.1 (93381 bp)
Overview 1 RT 1: 1600-4633 bp Neighborhood of RT #1 [1600, 4633] RVT-GII Feature: gene Location: 1600-1821 bp Feature: gene Location: 2083-2313 bp Feature: gene Location: 2547-4034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2952-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 952 -3642 bp Feature: gene Location: 4188-4484 bp Feature: gene Location: 4487-4633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXPT01000012.1 (151840 bp)
Overview 1 RT 1: 32146-38999 bp Neighborhood of RT #1 [32146, 39016] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32146-32811 bp Feature: domain Description: INT_P4_C Location: 32251-32809 bp Feature: domain Description: INT_P4_C Location: 3 2251-3 2809 bp Feature: gene Location: 33072-33512 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: domain Description: Integrase_1 Location: 3 3 078-3 3 294 bp Feature: gene Location: 33569-35647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 977-3 4421 bp Feature: gene Location: 35647-38256 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: domain Description: FimD Location: 3 5704-3 8245 bp Feature: gene Location: 38288-39016 bp Feature: domain Description: FimC Location: 38336-38999 bp Feature: domain Description: FimC Location: 3 83 3 6-3 8999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)