myRT

myRT report for GCA_900181545.1_14936_2_28

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Seq: FXQC01000033.1 (30515 bp)
Overview 1 RT 1: 12055-16138 bp Neighborhood of RT #1 [12055, 16275] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 12055-12486 bp Feature: domain Description: PRK10276 Location: 12106-12469 bp Feature: domain Description: PRK1 0276 Location: 1 21 06-1 2469 bp Feature: gene Location: 12610-12843 bp Feature: gene Location: 12894-14381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13299-13989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3299-1 3989 bp Feature: gene Location: 14627-15601 bp Feature: domain Description: StbA Location: 14633-15578 bp Feature: domain Description: StbA Location: 1 4633-1 5578 bp Feature: gene Location: 15604-16275 bp Feature: domain Description: Plasmid_stab_B Location: 15619-15826 bp Feature: domain Description: Plasmid_stab_B Location: 1 561 9-1 5826 bp Feature: domain Description: Plasmid_stab_B Location: 15931-16138 bp Feature: domain Description: Plasmid_stab_B Location: 1 5931 -1 61 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXQC01000021.1 (92076 bp)
Overview 1 RT 1: 87197-90251 bp Neighborhood of RT #1 [87197, 90251] RVT-GII Feature: gene Location: 87197-87343 bp Feature: gene Location: 87346-87642 bp Feature: gene Location: 87796-89283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88201-88891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 01-88891 bp Feature: gene Location: 89517-89747 bp Feature: gene Location: 90081-90251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXQC01000012.1 (151875 bp)
Overview 1 RT 1: 112862-119730 bp Neighborhood of RT #1 [112862, 119732] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112862-113590 bp Feature: domain Description: FimC Location: 112910-113573 bp Feature: domain Description: FimC Location: 112910-113 573 bp Feature: gene Location: 113622-116231 bp Feature: domain Description: FimD Location: 113679-116220 bp Feature: domain Description: FimD Location: 113 679-116220 bp Feature: gene Location: 116231-118309 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116639-117083 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11663 9-117083 bp Feature: gene Location: 118366-118806 bp Feature: domain Description: Integrase_1 Location: 118372-118588 bp Feature: domain Description: Integrase_1 Location: 1183 72-118588 bp Feature: gene Location: 119067-119732 bp Feature: domain Description: INT_P4_C Location: 119172-119730 bp Feature: domain Description: INT_P4_C Location: 119172-11973 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)