myRT

myRT report for GCA_900181635.1_14936_3_34

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Seq: FXQG01000010.1 (151828 bp)
Overview 1 RT 1: 32128-38981 bp Neighborhood of RT #1 [32128, 38998] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32128-32793 bp Feature: domain Description: INT_P4_C Location: 32233-32791 bp Feature: domain Description: INT_P4_C Location: 32233-32791 bp Feature: gene Location: 33054-33494 bp Feature: domain Description: Integrase_1 Location: 33060-33276 bp Feature: domain Description: Integrase_1 Location: 33060-33276 bp Feature: gene Location: 33551-35629 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33959-34403 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33959-34403 bp Feature: gene Location: 35629-38238 bp Feature: domain Description: FimD Location: 35686-38227 bp Feature: domain Description: FimD Location: 35686-38227 bp Feature: gene Location: 38270-38998 bp Feature: domain Description: FimC Location: 38318-38981 bp Feature: domain Description: FimC Location: 3831 8-38981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXQG01000023.1 (89288 bp)
Overview 1 RT 1: 87144-88838 bp Neighborhood of RT #1 [87144, 89230] RVT-GII Feature: gene Location: 87144-87290 bp Feature: gene Location: 87293-87589 bp Feature: gene Location: 87743-89230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88148-88838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88148-88838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXQG01000043.1 (22588 bp)
Overview 1 RT 1: 6314-10504 bp Neighborhood of RT #1 [6314, 10504] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 6314-6985 bp Feature: domain Description: Plasmid_stab_B Location: 6329-6536 bp Feature: domain Description: Plasmid_stab_B Location: 63 29-653 6 bp Feature: domain Description: Plasmid_stab_B Location: 6641-6848 bp Feature: domain Description: Plasmid_stab_B Location: 6641-6848 bp Feature: gene Location: 6988-7962 bp Feature: domain Description: StbA Location: 6994-7939 bp Feature: domain Description: StbA Location: 6994-793 9 bp Feature: gene Location: 8208-9695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8613-9303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8613 -93 03 bp Feature: gene Location: 9746-9979 bp Feature: gene Location: 10109-10504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII