myRT

myRT report for GCA_900181675.1_14936_2_35

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Seq: FXQI01000012.1 (151868 bp)
Overview 1 RT 1: 112855-119723 bp Neighborhood of RT #1 [112855, 119725] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112855-113583 bp Feature: domain Description: FimC Location: 112903-113566 bp Feature: domain Description: FimC Location: 1 1 2903-1 1 3566 bp Feature: gene Location: 113615-116224 bp Feature: domain Description: FimD Location: 113672-116213 bp Feature: domain Description: FimD Location: 1 1 3672-1 1 621 3 bp Feature: gene Location: 116224-118302 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116632-117076 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6632-1 1 7076 bp Feature: gene Location: 118359-118799 bp Feature: domain Description: Integrase_1 Location: 118365-118581 bp Feature: domain Description: Integrase_1 Location: 1 1 8365-1 1 8581 bp Feature: gene Location: 119060-119725 bp Feature: domain Description: INT_P4_C Location: 119165-119723 bp Feature: domain Description: INT_P4_C Location: 1 1 91 65-1 1 9723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXQI01000041.1 (8741 bp)
Overview 1 RT 1: 1683-4952 bp Neighborhood of RT #1 [1683, 4966] RVT-GII PRK10276 Feature: gene Location: 1683-1853 bp Feature: gene Location: 2187-2417 bp Feature: gene Location: 2651-4138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3056-3746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3056-3746 bp Feature: gene Location: 4144-4311 bp Feature: gene Location: 4541-4966 bp Feature: domain Description: PRK10276 Location: 4544-4952 bp Feature: domain Description: PRK102 76 Location: 4544-4952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FXQI01000032.1 (23104 bp)
Overview 1 RT 1: 5931-10121 bp Neighborhood of RT #1 [5931, 10121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5931-6602 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: gene Location: 6605-7579 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: gene Location: 7825-9312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 823 0-8920 bp Feature: gene Location: 9363-9596 bp Feature: gene Location: 9726-10121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII