myRT

myRT report for GCA_900181715.1_14936_2_38

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Seq: FXQM01000013.1 (151847 bp)
Overview 1 RT 1: 32144-38997 bp Neighborhood of RT #1 [32144, 39014] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32144-32809 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: gene Location: 33070-33510 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: gene Location: 33567-35645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-34419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-3441 9 bp Feature: gene Location: 35645-38254 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: gene Location: 38286-39014 bp Feature: domain Description: FimC Location: 38334-38997 bp Feature: domain Description: FimC Location: 38334-38997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXQM01000036.1 (23736 bp)
Overview 1 RT 1: 6614-10804 bp Neighborhood of RT #1 [6614, 10804] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 6614-7285 bp Feature: domain Description: Plasmid_stab_B Location: 6629-6836 bp Feature: domain Description: Plasmid_stab_B Location: 662 9-6836 bp Feature: domain Description: Plasmid_stab_B Location: 6941-7148 bp Feature: domain Description: Plasmid_stab_B Location: 6941-7148 bp Feature: gene Location: 7288-8262 bp Feature: domain Description: StbA Location: 7294-8239 bp Feature: domain Description: StbA Location: 72 94-82 39 bp Feature: gene Location: 8508-9995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8913-9603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8913-9603 bp Feature: gene Location: 10046-10279 bp Feature: gene Location: 10409-10804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXQM01000022.1 (90909 bp)
Overview 1 RT 1: 59-2145 bp Neighborhood of RT #1 [59, 2145] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1996 bp Feature: gene Location: 1999-2145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII