myRT

myRT report for GCA_900181735.1_14936_2_36

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Seq: FXQX01000027.1 (41223 bp)
Overview 1 RT 1: 1847-5095 bp Neighborhood of RT #1 [1847, 5109] RVT-GII PRK10276 Feature: gene Location: 1847-2068 bp Feature: gene Location: 2330-2560 bp Feature: gene Location: 2794-4281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3199-3889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 99-3889 bp Feature: gene Location: 4287-4454 bp Feature: gene Location: 4684-5109 bp Feature: domain Description: PRK10276 Location: 4687-5095 bp Feature: domain Description: PRK1 0276 Location: 4687-5095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FXQX01000030.1 (32378 bp)
Overview 1 RT 1: 5931-10121 bp Neighborhood of RT #1 [5931, 10121] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 5931-6602 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 5946-6153 bp Feature: domain Description: Plasmid_stab_B Location: 6258-6465 bp Feature: domain Description: Plasmid_stab_B Location: 62 58-6465 bp Feature: gene Location: 6605-7579 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: domain Description: StbA Location: 6611-7556 bp Feature: gene Location: 7825-9312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8230-8920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 30-892 0 bp Feature: gene Location: 9363-9596 bp Feature: gene Location: 9726-10121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXQX01000010.1 (151844 bp)
Overview 1 RT 1: 32146-38999 bp Neighborhood of RT #1 [32146, 39016] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32146-32811 bp Feature: domain Description: INT_P4_C Location: 32251-32809 bp Feature: domain Description: INT_P4_C Location: 3 2251-3 2809 bp Feature: gene Location: 33072-33512 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: domain Description: Integrase_1 Location: 3 3 078-3 3 294 bp Feature: gene Location: 33569-35647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 977-3 4421 bp Feature: gene Location: 35647-38256 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: domain Description: FimD Location: 3 5704-3 8245 bp Feature: gene Location: 38288-39016 bp Feature: domain Description: FimC Location: 38336-38999 bp Feature: domain Description: FimC Location: 3 83 3 6-3 8999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)