myRT

myRT report for GCA_900181765.1_14936_2_39

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Seq: FXQQ01000029.1 (33132 bp)
Overview 1 RT 1: 6606-10809 bp Neighborhood of RT #1 [6606, 10826] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 6606-7277 bp Feature: domain Description: Plasmid_stab_B Location: 6621-6828 bp Feature: domain Description: Plasmid_stab_B Location: 6621 -6828 bp Feature: domain Description: Plasmid_stab_B Location: 6933-7140 bp Feature: domain Description: Plasmid_stab_B Location: 6933-71 40 bp Feature: gene Location: 7280-8254 bp Feature: domain Description: StbA Location: 7286-8231 bp Feature: domain Description: StbA Location: 7286-8231 bp Feature: gene Location: 8500-9987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8905-9595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8905-9595 bp Feature: gene Location: 10038-10271 bp Feature: gene Location: 10395-10826 bp Feature: domain Description: PRK10276 Location: 10446-10809 bp Feature: domain Description: PRK1 0276 Location: 1 0446-1 0809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FXQQ01000039.1 (15618 bp)
Overview 1 RT 1: 59-2293 bp Neighborhood of RT #1 [59, 2313] RVT-GII HHA Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1571-1972 bp Feature: gene Location: 2062-2313 bp Feature: domain Description: HHA Location: 2110-2293 bp Feature: domain Description: HHA Location: 2 110-2 2 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HHA (pfam05321)

Seq: FXQQ01000002.1 (537490 bp)
Overview 1 RT 1: 498467-505335 bp Neighborhood of RT #1 [498467, 505337] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 498467-499195 bp Feature: domain Description: FimC Location: 498515-499178 bp Feature: domain Description: FimC Location: 498515-499178 bp Feature: gene Location: 499227-501836 bp Feature: domain Description: FimD Location: 499284-501825 bp Feature: domain Description: FimD Location: 499284-501825 bp Feature: gene Location: 501836-503914 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 502244-502688 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 502244-502688 bp Feature: gene Location: 503971-504411 bp Feature: domain Description: Integrase_1 Location: 503977-504193 bp Feature: domain Description: Integrase_1 Location: 503 977-504193 bp Feature: gene Location: 504672-505337 bp Feature: domain Description: INT_P4_C Location: 504777-505335 bp Feature: domain Description: INT_P4_C Location: 504777-5053 3 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)