myRT

myRT report for GCA_900181855.1_14936_3_41

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Seq: FXRF01000030.1 (27836 bp)
Overview 1 RT 1: 18286-22593 bp Neighborhood of RT #1 [18286, 22601] InsE PHA02517 RVT-GII GIIM PHA02517 APH Feature: gene Location: 18286-18570 bp Feature: domain Description: InsE Location: 18298-18559 bp Feature: domain Description: InsE Location: 1 8298-1 8559 bp Feature: gene Location: 18618-19037 bp Feature: domain Description: PHA02517 Location: 18633-18972 bp Feature: domain Description: PHA0251 7 Location: 1 8633-1 8972 bp Feature: gene Location: 19629-21152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19902-20634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9902-20634 bp Feature: domain Description: GIIM Note: maturase Location: 20709-20907 bp Feature: domain Description: GIIM Note: maturase Location: 20709-20907 bp Feature: gene Location: 21302-21691 bp Feature: domain Description: PHA02517 Location: 21308-21683 bp Feature: domain Description: PHA0251 7 Location: 21 308-21 683 bp Feature: gene Location: 21612-22601 bp Feature: domain Description: APH Location: 21840-22593 bp Feature: domain Description: APH Location: 21 840-22593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), APH (pfam01636)

Seq: FXRF01000002.1 (437833 bp)
Overview 1 RT 1: 318130-324983 bp Neighborhood of RT #1 [318130, 325000] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 318130-318795 bp Feature: domain Description: INT_P4_C Location: 318235-318793 bp Feature: domain Description: INT_P4_C Location: 3182 35-318793 bp Feature: gene Location: 319056-319496 bp Feature: domain Description: Integrase_1 Location: 319062-319278 bp Feature: domain Description: Integrase_1 Location: 319062 -3192 78 bp Feature: gene Location: 319553-321631 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 319961-320405 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 319961-32 0405 bp Feature: gene Location: 321631-324240 bp Feature: domain Description: FimD Location: 321688-324229 bp Feature: domain Description: FimD Location: 32 1688-32 42 2 9 bp Feature: gene Location: 324272-325000 bp Feature: domain Description: FimC Location: 324320-324983 bp Feature: domain Description: FimC Location: 32 432 0-32 4983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXRF01000036.1 (6151 bp)
Overview 1 RT 1: 3776-5699 bp Neighborhood of RT #1 [3776, 6091] PRK10276 RVT-GII Feature: gene Location: 3776-4201 bp Feature: domain Description: PRK10276 Location: 3779-4187 bp Feature: domain Description: PRK10276 Location: 3 779-4187 bp Feature: gene Location: 4431-4598 bp Feature: gene Location: 4604-6091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII