myRT

myRT report for GCA_900182025.1_14936_3_57

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Seq: FXRU01000018.1 (102660 bp)
Overview 1 RT 1: 347-3598 bp Neighborhood of RT #1 [347, 3600] RVT-GII PRK10276 umuC Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Feature: gene Location: 1913-2332 bp Feature: domain Description: PRK10276 Location: 1916-2327 bp Feature: domain Description: PRK1 0276 Location: 1 91 6-2327 bp Feature: gene Location: 2335-3600 bp Feature: domain Description: umuC Location: 2338-3598 bp Feature: domain Description: umuC Location: 2338-3598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: FXRU01000028.1 (43892 bp)
Overview 1 RT 1: 17419-22907 bp Neighborhood of RT #1 [17419, 22915] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 17419-18090 bp Feature: domain Description: Plasmid_stab_B Location: 17434-17641 bp Feature: domain Description: Plasmid_stab_B Location: 17434-17641 bp Feature: domain Description: Plasmid_stab_B Location: 17746-17953 bp Feature: domain Description: Plasmid_stab_B Location: 17746-17953 bp Feature: gene Location: 18093-19067 bp Feature: domain Description: StbA Location: 18099-19044 bp Feature: domain Description: StbA Location: 18099-19044 bp Feature: gene Location: 19313-20800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19718-20408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19718-2 0408 bp Feature: gene Location: 21213-21644 bp Feature: domain Description: PRK10276 Location: 21264-21627 bp Feature: domain Description: PRK102 76 Location: 2 12 64-2 162 7 bp Feature: gene Location: 21644-22915 bp Feature: domain Description: umuC Location: 21647-22907 bp Feature: domain Description: umuC Location: 2 1647-2 2 907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: FXRU01000013.1 (151848 bp)
Overview 1 RT 1: 112833-119701 bp Neighborhood of RT #1 [112833, 119703] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112833-113561 bp Feature: domain Description: FimC Location: 112881-113544 bp Feature: domain Description: FimC Location: 112881-113 544 bp Feature: gene Location: 113593-116202 bp Feature: domain Description: FimD Location: 113650-116191 bp Feature: domain Description: FimD Location: 113 650-116191 bp Feature: gene Location: 116202-118280 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116610-117054 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116610-117054 bp Feature: gene Location: 118337-118777 bp Feature: domain Description: Integrase_1 Location: 118343-118559 bp Feature: domain Description: Integrase_1 Location: 1183 43 -118559 bp Feature: gene Location: 119038-119703 bp Feature: domain Description: INT_P4_C Location: 119143-119701 bp Feature: domain Description: INT_P4_C Location: 119143 -119701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)