myRT

myRT report for GCA_900182045.1_14936_3_56

Download annotations/find similar RTs

Seq: FXRX01000009.1 (210961 bp)
Overview 1 RT 1: 112831-119699 bp Neighborhood of RT #1 [112831, 119701] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112831-113559 bp Feature: domain Description: FimC Location: 112879-113542 bp Feature: domain Description: FimC Location: 1 1 2879-1 1 3542 bp Feature: gene Location: 113591-116200 bp Feature: domain Description: FimD Location: 113648-116189 bp Feature: domain Description: FimD Location: 1 1 3648-1 1 61 89 bp Feature: gene Location: 116200-118278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116608-117052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6608-1 1 7052 bp Feature: gene Location: 118335-118775 bp Feature: domain Description: Integrase_1 Location: 118341-118557 bp Feature: domain Description: Integrase_1 Location: 1 1 8341 -1 1 8557 bp Feature: gene Location: 119036-119701 bp Feature: domain Description: INT_P4_C Location: 119141-119699 bp Feature: domain Description: INT_P4_C Location: 1 1 91 41 -1 1 9699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXRX01000012.1 (164254 bp)
Overview 1 RT 1: 73403-77094 bp Neighborhood of RT #1 [73403, 77094] INT_Cre_C RVT-GII Feature: gene Location: 73403-73720 bp Feature: gene Location: 73786-74922 bp Feature: domain Description: INT_Cre_C Location: 74209-74863 bp Feature: domain Description: INT_Cre_C Location: 742 09-74863 bp Feature: gene Location: 75008-76495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75413-76103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75413-76103 bp Feature: gene Location: 76520-76945 bp Feature: gene Location: 76948-77094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII

Seq: FXRX01000030.1 (45251 bp)
Overview 1 RT 1: 34432-38515 bp Neighborhood of RT #1 [34432, 38652] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 34432-34863 bp Feature: domain Description: PRK10276 Location: 34483-34846 bp Feature: domain Description: PRK10276 Location: 3 4483 -3 4846 bp Feature: gene Location: 34987-35220 bp Feature: gene Location: 35271-36758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35676-36366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5676-3 63 66 bp Feature: gene Location: 37004-37978 bp Feature: domain Description: StbA Location: 37010-37955 bp Feature: domain Description: StbA Location: 3 7010-3 7955 bp Feature: gene Location: 37981-38652 bp Feature: domain Description: Plasmid_stab_B Location: 37996-38203 bp Feature: domain Description: Plasmid_stab_B Location: 3 7996-3 8203 bp Feature: domain Description: Plasmid_stab_B Location: 38308-38515 bp Feature: domain Description: Plasmid_stab_B Location: 3 83 08-3 8515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)