myRT

myRT report for GCA_900182055.1_14936_3_58

Download annotations/find similar RTs

Seq: FXSA01000017.1 (94363 bp)
Overview 1 RT 1: 3288-7153 bp Neighborhood of RT #1 [3288, 7153] umuC PRK10276 RVT-GII Feature: gene Location: 3288-4559 bp Feature: domain Description: umuC Location: 3291-4551 bp Feature: domain Description: umuC Location: 3291 -4551 bp Feature: gene Location: 4559-4981 bp Feature: domain Description: PRK10276 Location: 4565-4967 bp Feature: domain Description: PRK1 0276 Location: 4565-4967 bp Feature: gene Location: 5067-6554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5472-6162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5472-61 62 bp Feature: gene Location: 6708-7004 bp Feature: gene Location: 7007-7153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: FXSA01000034.1 (28195 bp)
Overview 1 RT 1: 18045-22128 bp Neighborhood of RT #1 [18045, 22265] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 18045-18476 bp Feature: domain Description: PRK10276 Location: 18096-18459 bp Feature: domain Description: PRK102 76 Location: 18096-18459 bp Feature: gene Location: 18600-18833 bp Feature: gene Location: 18884-20371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19289-19979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 89-19979 bp Feature: gene Location: 20617-21591 bp Feature: domain Description: StbA Location: 20623-21568 bp Feature: domain Description: StbA Location: 2 062 3-2 1568 bp Feature: gene Location: 21594-22265 bp Feature: domain Description: Plasmid_stab_B Location: 21609-21816 bp Feature: domain Description: Plasmid_stab_B Location: 2 1609-2 1816 bp Feature: domain Description: Plasmid_stab_B Location: 21921-22128 bp Feature: domain Description: Plasmid_stab_B Location: 2 192 1-2 2 12 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXSA01000010.1 (151844 bp)
Overview 1 RT 1: 112831-119699 bp Neighborhood of RT #1 [112831, 119701] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112831-113559 bp Feature: domain Description: FimC Location: 112879-113542 bp Feature: domain Description: FimC Location: 112879-113 542 bp Feature: gene Location: 113591-116200 bp Feature: domain Description: FimD Location: 113648-116189 bp Feature: domain Description: FimD Location: 113 648-116189 bp Feature: gene Location: 116200-118278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116608-117052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116608-117052 bp Feature: gene Location: 118335-118775 bp Feature: domain Description: Integrase_1 Location: 118341-118557 bp Feature: domain Description: Integrase_1 Location: 1183 41-118557 bp Feature: gene Location: 119036-119701 bp Feature: domain Description: INT_P4_C Location: 119141-119699 bp Feature: domain Description: INT_P4_C Location: 119141-119699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)