myRT

myRT report for GCA_900182155.1_14936_3_65

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Seq: FXSL01000005.1 (379910 bp)
Overview 1 RT 1: 32146-38999 bp Neighborhood of RT #1 [32146, 39016] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32146-32811 bp Feature: domain Description: INT_P4_C Location: 32251-32809 bp Feature: domain Description: INT_P4_C Location: 32251 -32809 bp Feature: gene Location: 33072-33512 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: domain Description: Integrase_1 Location: 33078-33294 bp Feature: gene Location: 33569-35647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33977-34421 bp Feature: gene Location: 35647-38256 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: domain Description: FimD Location: 35704-38245 bp Feature: gene Location: 38288-39016 bp Feature: domain Description: FimC Location: 38336-38999 bp Feature: domain Description: FimC Location: 38336-38999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FXSL01000026.1 (40174 bp)
Overview 1 RT 1: 6206-10396 bp Neighborhood of RT #1 [6206, 10396] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 6206-6877 bp Feature: domain Description: Plasmid_stab_B Location: 6221-6428 bp Feature: domain Description: Plasmid_stab_B Location: 62 2 1-642 8 bp Feature: domain Description: Plasmid_stab_B Location: 6533-6740 bp Feature: domain Description: Plasmid_stab_B Location: 6533-6740 bp Feature: gene Location: 6880-7854 bp Feature: domain Description: StbA Location: 6886-7831 bp Feature: domain Description: StbA Location: 6886-7831 bp Feature: gene Location: 8100-9587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8505-9195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8505-9195 bp Feature: gene Location: 9638-9871 bp Feature: gene Location: 10001-10396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXSL01000032.1 (16232 bp)
Overview 1 RT 1: 13431-16231 bp Neighborhood of RT #1 [13431, 16231] RVT-GII Feature: gene Location: 13431-13601 bp Feature: gene Location: 13935-14165 bp Feature: gene Location: 14399-15886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14804-15494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14804-15494 bp Feature: gene Location: 16040-16231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII