myRT

myRT report for GCA_900182505.1_14936_2_23

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Seq: FXSV01000006.1 (385801 bp)
Overview 1 RT 1: 98002-104423 bp Neighborhood of RT #1 [98002, 104434] EAL RVT-UG4 FimD Feature: gene Location: 98002-98208 bp Feature: gene Location: 98298-99152 bp Feature: domain Description: EAL Location: 98982-99135 bp Feature: domain Description: EAL Location: 98982-991 35 bp Feature: gene Location: 99795-101825 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 100203-100647 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 00203-1 00647 bp Feature: gene Location: 101322-101732 bp Feature: gene Location: 101825-104434 bp Feature: domain Description: FimD Location: 101882-104423 bp Feature: domain Description: FimD Location: 1 01 882-1 04423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188)

Seq: FXSV01000034.1 (12102 bp)
Overview 1 RT 1: 2543-6391 bp Neighborhood of RT #1 [2543, 6391] HHA RVT-GII INT_Cre_C Feature: gene Location: 2543-2794 bp Feature: domain Description: HHA Location: 2591-2774 bp Feature: domain Description: HHA Location: 2 591-2 774 bp Feature: gene Location: 3089-3301 bp Feature: gene Location: 3376-4665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3703-4234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3703-42 34 bp Feature: gene Location: 4872-6008 bp Feature: domain Description: INT_Cre_C Location: 5295-5949 bp Feature: domain Description: INT_Cre_C Location: 52 95-5949 bp Feature: gene Location: 6074-6391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: FXSV01000024.1 (32681 bp)
Overview 1 RT 1: 19527-23610 bp Neighborhood of RT #1 [19527, 23747] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 19527-19958 bp Feature: domain Description: PRK10276 Location: 19578-19941 bp Feature: domain Description: PRK10276 Location: 19578-19941 bp Feature: gene Location: 20082-20315 bp Feature: gene Location: 20366-21853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20771-21461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20771-21461 bp Feature: gene Location: 22099-23073 bp Feature: domain Description: StbA Location: 22105-23050 bp Feature: domain Description: StbA Location: 22105-23 050 bp Feature: gene Location: 23076-23747 bp Feature: domain Description: Plasmid_stab_B Location: 23091-23298 bp Feature: domain Description: Plasmid_stab_B Location: 23 091-23 298 bp Feature: domain Description: Plasmid_stab_B Location: 23403-23610 bp Feature: domain Description: Plasmid_stab_B Location: 23 403 -23 610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)