myRT

myRT report for GCA_900182605.1_IMG-taxon_2724679709_annotated_assembly

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Seq: FXTB01000009.1 Saccharicrinis carchari strain DSM 27040 genome assembly, contig: Ga0170432_109, whole genome shotgun sequence (160822 bp)
Overview 1 RT 1: 19664-23761 bp Neighborhood of RT #1 [19664, 23799] purE MFS_OFA_like RVT-GII GIIM MFS_OFA_like T6A_YeaZ Feature: gene Location: 19664-19939 bp Feature: domain Description: purE Location: 19670-19934 bp Feature: domain Description: purE Location: 1 9670-1 9934 bp Feature: gene Location: 19947-20261 bp Feature: domain Description: MFS_OFA_like Location: 19968-20217 bp Feature: domain Description: MFS_OFA_like Location: 1 9968-2021 7 bp Feature: gene Location: 20657-22063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21017-21635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 01 7-21 635 bp Feature: domain Description: GIIM Note: maturase Location: 21677-21881 bp Feature: domain Description: GIIM Note: maturase Location: 21 677-21 881 bp Feature: gene Location: 22154-23041 bp Feature: domain Description: MFS_OFA_like Location: 22157-22997 bp Feature: domain Description: MFS_OFA_like Location: 221 57-22997 bp Feature: gene Location: 23092-23799 bp Feature: domain Description: T6A_YeaZ Location: 23104-23761 bp Feature: domain Description: T6A_YeaZ Location: 231 04-23761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT purE (TIGR01162), MFS_OFA_like (cd17353), RVT-GII, GIIM (pfam08388), T6A_YeaZ (TIGR03725)

Seq: FXTB01000017.1 Saccharicrinis carchari strain DSM 27040 genome assembly, contig: Ga0170432_117, whole genome shotgun sequence (21048 bp)
Overview 1 RT 1: 6877-12887 bp Neighborhood of RT #1 [6877, 12887] VirE_N PriCT_2 RVT-UG28b HTH_XRE Feature: gene Location: 6877-7620 bp Feature: gene Location: 8097-9107 bp Feature: domain Description: VirE_N Location: 8277-8649 bp Feature: domain Description: VirE_N Location: 82 77-8649 bp Feature: domain Description: PriCT_2 Location: 8838-9060 bp Feature: domain Description: PriCT_2 Location: 8838-9060 bp Feature: gene Location: 9242-11218 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 9704-10433 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 9704-10433 bp Feature: gene Location: 11670-11867 bp Feature: domain Description: HTH_XRE Location: 11679-11844 bp Feature: domain Description: HTH_XRE Location: 11679-11844 bp Feature: gene Location: 11871-12887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), PriCT_2 (pfam08707), RVT-UG28b, HTH_XRE (smart00530)