myRT

myRT report for GCA_900184925.1_Ruminococcaceae_HV4-5-B5C

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Seq: FXYJ02000002.1 (476868 bp)
Overview 1 RT 1: 467116-470736 bp Neighborhood of RT #1 [467116, 470736] RVT_N RVT-GII Feature: gene Location: 467116-467373 bp Feature: gene Location: 467828-468040 bp Feature: gene Location: 468650-469849 bp Feature: domain Description: RVT_N Location: 468698-468938 bp Feature: domain Description: RVT_N Location: 468698-468938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468986-469601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468986-469601 bp Feature: gene Location: 469973-470170 bp Feature: gene Location: 470404-470736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: FXYJ02000022.1 (1526 bp)
Overview 1 RT 1: 93-1503 bp Neighborhood of RT #1 [93, 1523] RVT-UG28 RVT-UNC Feature: gene Location: 93-638 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 105-264 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 105-2 64 bp Feature: gene Location: 660-1523 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1041-1503 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1041-1503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, RVT-GII/RVT-CRISPR/RVT-UG27(RVT-UNC)

Seq: FXYJ02000019.1 (1999 bp)
Overview 1 RT 1: 1-1451 bp Neighborhood of RT #1 [1, 1451] RVT-GII Feature: gene Location: 1-1128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 322-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 22-1057 bp Feature: gene Location: 1305-1451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXYJ02000005.1 (315749 bp)
Overview 1 RT 1: 232447-237020 bp Neighborhood of RT #1 [232447, 237553] DUF2829 GH25_LytC-like PHA01511 RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 232447-232917 bp Feature: domain Description: DUF2829 Location: 232657-232912 bp Feature: domain Description: DUF2829 Location: 232657-232912 bp Feature: gene Location: 233013-234275 bp Feature: domain Description: GH25_LytC-like Location: 233028-233604 bp Feature: domain Description: GH25_LytC-like Location: 233028-233604 bp Feature: domain Description: PHA01511 Location: 233646-233784 bp Feature: domain Description: PHA01511 Location: 23364 6-233784 bp Feature: gene Location: 234534-235610 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 234744-235398 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 234 74 4 -235398 bp Feature: gene Location: 235913-236257 bp Feature: domain Description: Avd_like Location: 235943-236249 bp Feature: domain Description: Avd_like Location: 23594 3-23624 9 bp Feature: gene Location: 236405-237553 bp Feature: domain Description: FGE-sulfatase Location: 236639-237020 bp Feature: domain Description: FGE-sulfatase Location: 236639-237020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2829 (pfam11195), GH25_LytC-like (cd06414), PHA01511 (coat protein), RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)