myRT

myRT report for GCA_900188145.1_IMG-taxon_2706794911_annotated_assembly

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Seq: FZOJ01000003.1 (297557 bp)
Overview 1 RT 1: 2316-5083 bp Neighborhood of RT #1 [2316, 5367] RVT-UNC RVT-GII PhdYeFM_antitox DDE_5 Feature: gene Location: 2316-2513 bp Feature: gene Location: 2586-3293 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 2589-3270 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 2589-3270 bp Feature: gene Location: 3370-3747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583-3733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3583-3733 bp Feature: gene Location: 4134-4382 bp Feature: domain Description: PhdYeFM_antitox Location: 4155-4302 bp Feature: domain Description: PhdYeFM_antitox Location: 41 55-4302 bp Feature: gene Location: 4849-5367 bp Feature: domain Description: DDE_5 Location: 4903-5083 bp Feature: domain Description: DDE_5 Location: 4903-5083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B3/B4(RVT-UNC), RVT-GII, PhdYeFM_antitox (pfam02604), DDE_5 (pfam13546)

Seq: FZOJ01000001.1 (386564 bp)
Overview 1 RT 1: 376737-380763 bp Neighborhood of RT #1 [376737, 380763] Acetyltransf_1 Acetyltransf_10 RVT-GII SerB Feature: gene Location: 376737-377264 bp Feature: domain Description: Acetyltransf_1 Location: 376887-377187 bp Feature: domain Description: Acetyltransf_1 Location: 376887-377187 bp Feature: gene Location: 377485-377997 bp Feature: domain Description: Acetyltransf_10 Location: 377650-377953 bp Feature: domain Description: Acetyltransf_10 Location: 377650-377953 bp Feature: gene Location: 378544-378918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378547-378901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378547-378901 bp Feature: gene Location: 379563-380201 bp Feature: domain Description: SerB Location: 379572-380166 bp Feature: domain Description: SerB Location: 379572 -380166 bp Feature: gene Location: 380317-380763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), Acetyltransf_10 (pfam13673), RVT-GII, SerB (COG0560)

Seq: FZOJ01000007.1 (189932 bp)
Overview 1 RT 1: 172788-175911 bp Neighborhood of RT #1 [172788, 175955] group_II_RT_mat RVT-GII GIIM COG3666 Feature: gene Location: 172788-173003 bp Feature: gene Location: 173022-173270 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 173028-173247 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 173 028-173 247 bp Feature: gene Location: 173443-174696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173656-174313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 656-1743 13 bp Feature: domain Description: GIIM Note: maturase Location: 174394-174610 bp Feature: domain Description: GIIM Note: maturase Location: 1743 94-174610 bp Feature: gene Location: 174882-175010 bp Feature: gene Location: 175488-175955 bp Feature: domain Description: COG3666 Location: 175497-175911 bp Feature: domain Description: COG3 666 Location: 175497-175911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), COG3666 (Transposase )

Seq: FZOJ01000018.1 (89903 bp)
Overview 1 RT 1: 61817-66388 bp Neighborhood of RT #1 [61817, 66388] InsE PHA02517 RVT_N RVT-GII GIIM PHA02517 Feature: gene Location: 61817-62119 bp Feature: domain Description: InsE Location: 61838-62102 bp Feature: domain Description: InsE Location: 61838-62102 bp Feature: gene Location: 62266-62760 bp Feature: domain Description: PHA02517 Location: 62275-62740 bp Feature: domain Description: PHA02517 Location: 62275-6274 0 bp Feature: gene Location: 63287-64768 bp Feature: domain Description: RVT_N Location: 63359-63602 bp Feature: domain Description: RVT_N Location: 63359-63602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63650-64307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63650-64 307 bp Feature: domain Description: GIIM Note: maturase Location: 64358-64595 bp Feature: domain Description: GIIM Note: maturase Location: 64 358-64 595 bp Feature: gene Location: 64794-65156 bp Feature: domain Description: PHA02517 Location: 64863-65130 bp Feature: domain Description: PHA02517 Location: 64 863-65130 bp Feature: gene Location: 65360-66388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)