myRT

myRT report for GCA_900195325.1_F1_25A

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Seq: FZFZ01000572.1 (500 bp)
Overview 1 RT 1: 1-499 bp Neighborhood of RT #1 [1, 498] RVT-GII Feature: gene Location: 1-498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FZFZ01000050.1 (34942 bp)
Overview 1 RT 1: 29845-34806 bp Neighborhood of RT #1 [29845, 34940] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 Feature: gene Location: 29845-32427 bp Feature: domain Description: mutS1 Location: 29896-32416 bp Feature: domain Description: mutS1 Location: 2 9896-32 416 bp Feature: gene Location: 32572-34032 bp Feature: domain Description: INT_Rci_Hp1_C Location: 32947-33154 bp Feature: domain Description: INT_Rci_Hp1_C Location: 32 947-33154 bp Feature: domain Description: INT_P4_C Location: 33373-33910 bp Feature: domain Description: INT_P4_C Location: 33373-33910 bp Feature: gene Location: 34029-34940 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 34311-34806 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 34311-34806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3

Seq: FZFZ01000030.1 (43472 bp)
Overview 1 RT 1: 34942-42799 bp Neighborhood of RT #1 [34942, 43338] prfC SLATT_5 RVT-UG17 Caudo_TAP phage_tail_N Phage_fiber_2 Phage_fiber_2 Collar Feature: gene Location: 34942-36528 bp Feature: domain Description: prfC Location: 34960-36526 bp Feature: domain Description: prfC Location: 3 4960-3 6526 bp Feature: gene Location: 37059-37763 bp Feature: domain Description: SLATT_5 Location: 37221-37731 bp Feature: domain Description: SLATT_5 Location: 3 7221-3 773 1 bp Feature: gene Location: 37741-39111 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 37969-38575 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 7969-3 8575 bp Feature: gene Location: 39224-39808 bp Feature: domain Description: Caudo_TAP Location: 39440-39797 bp Feature: domain Description: Caudo_TAP Location: 3 9440-3 9797 bp Feature: gene Location: 39808-43338 bp Feature: domain Description: phage_tail_N Location: 39811-40210 bp Feature: domain Description: phage_tail_N Location: 3 9811-40210 bp Feature: domain Description: Phage_fiber_2 Location: 41194-41314 bp Feature: domain Description: Phage_fiber_2 Location: 41194-413 14 bp Feature: domain Description: Phage_fiber_2 Location: 41326-41446 bp Feature: domain Description: Phage_fiber_2 Location: 413 26-41446 bp Feature: domain Description: Collar Location: 42661-42799 bp Feature: domain Description: Collar Location: 42661-42799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484)

Seq: FZFZ01000304.1 (1344 bp)
Overview 1 RT 1: 1-826 bp Neighborhood of RT #1 [1, 825] RVT-UG8 Feature: gene Location: 1-825 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 571-826 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 571-826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: FZFZ01000232.1 (3614 bp)
Overview 1 RT 1: 632-3592 bp Neighborhood of RT #1 [632, 3592] InsE Tra5 RVT-UG8 Feature: gene Location: 632-931 bp Feature: domain Description: InsE Location: 659-926 bp Feature: domain Description: InsE Location: 65 9-926 bp Feature: gene Location: 928-1794 bp Feature: domain Description: Tra5 Location: 1039-1789 bp Feature: domain Description: Tra5 Location: 1039-1789 bp Feature: gene Location: 2233-3348 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2236-2350 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2236-235 0 bp Feature: gene Location: 3425-3592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Tra5 (COG2801), RVT-UG8