myRT

myRT report for GCA_900195785.1_F2_6

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Seq: FZGT01000010.1 (152340 bp)
Overview 1 RT 1: 103693-107954 bp 2 RT 2: 114245-118305 bp Neighborhood of RT #1 [103693, 107954] PRK15011 RVT-Retrons Neighborhood of RT #2 [114245, 118305] RVT-UG7 YafY Feature: gene Location: 103693-104877 bp Feature: domain Description: PRK15011 Location: 103702-104875 bp Feature: domain Description: PRK1 501 1 Location: 1 03702-1 04875 bp Feature: gene Location: 105267-105443 bp Feature: gene Location: 105688-106638 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105787-106378 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 05787-1 06378 bp Feature: gene Location: 106625-107725 bp Feature: gene Location: 107799-107954 bp Feature: gene Location: 114245-114397 bp Feature: gene Location: 114634-115107 bp Feature: gene Location: 115171-116715 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 115549-115969 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 1 5549-1 1 5969 bp Feature: gene Location: 117163-118029 bp Feature: domain Description: YafY Location: 117463-117772 bp Feature: domain Description: YafY Location: 1 1 7463-1 1 7772 bp Feature: gene Location: 118135-118305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15011 (sugar efflux transporter SetB), RVT-Retrons, RVT-UG7, YafY (COG2378)

Seq: FZGT01000025.1 (74244 bp)
Overview 1 RT 1: 4334-7834 bp Neighborhood of RT #1 [4334, 7899] DDE_Tnp_IS66_C InsE RVT-GII GIIM PHA02517 Feature: gene Location: 4334-4519 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4385-4496 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4385-4496 bp Feature: gene Location: 4640-4891 bp Feature: domain Description: InsE Location: 4655-4841 bp Feature: domain Description: InsE Location: 4655-4841 bp Feature: gene Location: 5305-6828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5578-6310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5578-6310 bp Feature: domain Description: GIIM Note: maturase Location: 6385-6583 bp Feature: domain Description: GIIM Note: maturase Location: 6385-6583 bp Feature: gene Location: 6782-7207 bp Feature: gene Location: 7420-7899 bp Feature: domain Description: PHA02517 Location: 7480-7834 bp Feature: domain Description: PHA02 517 Location: 7480-7834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)