myRT

myRT report for GCA_900195815.1_F2_9

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Seq: FZGM01000028.1 (106723 bp)
Overview 1 RT 1: 75-3018 bp Neighborhood of RT #1 [75, 3020] RVT-Retrons COG3943 PRK15011 Feature: gene Location: 75-1025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174-765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 74-765 bp Feature: gene Location: 1308-1454 bp Feature: domain Description: COG3943 Location: 1311-1410 bp Feature: domain Description: COG3943 Location: 1 31 1 -1 41 0 bp Feature: gene Location: 1836-3020 bp Feature: domain Description: PRK15011 Location: 1845-3018 bp Feature: domain Description: PRK1 501 1 Location: 1 845-301 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3943 (Uncharacterized conserved protein ), PRK15011 (sugar efflux transporter SetB)

Seq: FZGM01000044.1 (45633 bp)
Overview 1 RT 1: 7551-11593 bp Neighborhood of RT #1 [7551, 11593] RVT-UG7 YafY Feature: gene Location: 7551-7703 bp Feature: gene Location: 7940-8413 bp Feature: gene Location: 8477-10021 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8855-9275 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 8855-92 75 bp Feature: gene Location: 10451-11317 bp Feature: domain Description: YafY Location: 10751-11060 bp Feature: domain Description: YafY Location: 10751-11060 bp Feature: gene Location: 11423-11593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, YafY (COG2378)

Seq: FZGM01000018.1 (71644 bp)
Overview 1 RT 1: 2606-5765 bp Neighborhood of RT #1 [2606, 5830] InsE RVT-GII GIIM PHA02517 Feature: gene Location: 2606-2857 bp Feature: domain Description: InsE Location: 2621-2807 bp Feature: domain Description: InsE Location: 2621-2807 bp Feature: gene Location: 2979-3149 bp Feature: gene Location: 3236-4759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3509-4241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 509-4241 bp Feature: domain Description: GIIM Note: maturase Location: 4316-4514 bp Feature: domain Description: GIIM Note: maturase Location: 43 16-4514 bp Feature: gene Location: 4713-5138 bp Feature: gene Location: 5351-5830 bp Feature: domain Description: PHA02517 Location: 5411-5765 bp Feature: domain Description: PHA02517 Location: 5411-5765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)