myRT

myRT report for GCA_900199695.1_PRJEB21885

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Seq: FZRH01000014.1 (748519 bp)
Overview 1 RT 1: 486639-491195 bp Neighborhood of RT #1 [486639, 491302] HTH_19 TPR_12 TPR_12 RVT-GII GIIM RVT-GII InsA DDE_Tnp_IS1595 Feature: gene Location: 486639-486776 bp Feature: gene Location: 486926-488221 bp Feature: domain Description: HTH_19 Location: 486965-487133 bp Feature: domain Description: HTH_1 9 Location: 486965-4871 33 bp Feature: domain Description: TPR_12 Location: 487490-487607 bp Feature: domain Description: TPR_1 2 Location: 487490-487607 bp Feature: domain Description: TPR_12 Location: 487763-487859 bp Feature: domain Description: TPR_1 2 Location: 487763-487859 bp Feature: gene Location: 488435-489031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488438-488597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488438-488597 bp Feature: domain Description: GIIM Note: maturase Location: 488654-488882 bp Feature: domain Description: GIIM Note: maturase Location: 488654-488882 bp Feature: gene Location: 489060-489650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489225-489624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489225-489624 bp Feature: gene Location: 489812-490270 bp Feature: gene Location: 490292-491302 bp Feature: domain Description: InsA Location: 490421-490706 bp Feature: domain Description: InsA Location: 490421 -490706 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 490727-491195 bp Feature: domain Description: DDE_Tnp_IS1 595 Location: 490727-491 1 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), TPR_12 (pfam13424), RVT-GII, GIIM (pfam08388), InsA (COG3677), DDE_Tnp_IS1595 (pfam12762)

Seq: FZRH01000015.1 (2002397 bp)
Overview 1 RT 1: 173965-180261 bp 2 RT 2: 829610-839190 bp Neighborhood of RT #1 [173965, 180353] PRK07726 RVT-GII HNHc PRK07726 bPGM Neighborhood of RT #2 [829610, 839213] RimP polC RVT-GII HNHc polC PRK09194 Feature: gene Location: 173965-174132 bp Feature: gene Location: 174396-175502 bp Feature: domain Description: PRK07726 Location: 174402-175488 bp Feature: domain Description: PRK0772 6 Location: 174402 -175488 bp Feature: gene Location: 176228-178018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176486-177182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176486-177182 bp Feature: domain Description: HNHc Note: nucleases Location: 177743-177884 bp Feature: domain Description: HNHc Note: nucleases Location: 177743-177884 bp Feature: gene Location: 178053-179108 bp Feature: domain Description: PRK07726 Location: 178122-178914 bp Feature: domain Description: PRK0772 6 Location: 17812 2 -178914 bp Feature: gene Location: 179688-180353 bp Feature: domain Description: bPGM Location: 179709-180261 bp Feature: domain Description: bPGM Location: 179709-1802 61 bp Feature: gene Location: 829610-830080 bp Feature: domain Description: RimP Location: 829616-830072 bp Feature: domain Description: RimP Location: 82 9616-830072 bp Feature: gene Location: 830357-831808 bp Feature: domain Description: polC Location: 830408-831806 bp Feature: domain Description: polC Location: 830408-831806 bp Feature: gene Location: 831873-833696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832179-832875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832 179-832 875 bp Feature: domain Description: HNHc Note: nucleases Location: 833430-833580 bp Feature: domain Description: HNHc Note: nucleases Location: 833430-833580 bp Feature: gene Location: 834414-837347 bp Feature: domain Description: polC Location: 834441-837333 bp Feature: domain Description: polC Location: 834441-837333 bp Feature: gene Location: 837507-839213 bp Feature: domain Description: PRK09194 Location: 837510-839190 bp Feature: domain Description: PRK09194 Location: 837510-839190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), bPGM (TIGR01990), RimP (COG0779), polC (TIGR00354), PRK09194 (prolyl-tRNA synthetase; Provisional)