myRT

myRT report for GCA_900205965.1_Clostridium_amygdalinum_DPC7176

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Seq: OAOF01000005.1 (280184 bp)
Overview 1 RT 1: 217872-223401 bp 2 RT 2: 241847-247551 bp Neighborhood of RT #1 [217872, 223409] RVT-GII cas_Csn1 DUF3852 Neighborhood of RT #2 [241847, 247628] AbiEii VirD4 RVT-GII HNHc VirD4 HTH_36 Feature: gene Location: 217872-218459 bp Feature: gene Location: 218443-219777 bp Feature: gene Location: 220422-222392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220854-221598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220854-221 598 bp Feature: domain Description: cas_Csn1 Location: 222093-222264 bp Feature: domain Description: cas_Csn1 Location: 222093-222264 bp Feature: gene Location: 222578-222997 bp Feature: gene Location: 223071-223409 bp Feature: domain Description: DUF3852 Location: 223077-223401 bp Feature: domain Description: DUF3852 Location: 223077-223401 bp Feature: gene Location: 241847-242725 bp Feature: domain Description: AbiEii Location: 241946-242651 bp Feature: domain Description: AbiEii Location: 241 946-242651 bp Feature: gene Location: 242812-244170 bp Feature: domain Description: VirD4 Location: 242938-244153 bp Feature: domain Description: VirD4 Location: 242938-2441 53 bp Feature: gene Location: 244879-246741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245194-245920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2451 94-245920 bp Feature: domain Description: HNHc Note: nucleases Location: 246481-246625 bp Feature: domain Description: HNHc Note: nucleases Location: 246481 -246625 bp Feature: gene Location: 246884-247354 bp Feature: domain Description: VirD4 Location: 246905-247106 bp Feature: domain Description: VirD4 Location: 246905-2471 06 bp Feature: gene Location: 247359-247628 bp Feature: domain Description: HTH_36 Location: 247389-247551 bp Feature: domain Description: HTH_36 Location: 247389-247551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), DUF3852 (pfam12963), AbiEii (pfam08843), VirD4 (COG3505), HNHc (smart00507), HTH_36 (pfam13730)