myRT

myRT report for GCA_900206265.1_IMG-taxon_2724679738_annotated_assembly

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Seq: LT907782.1 (3064288 bp)
Overview 1 RT 1: 40172-45438 bp 2 RT 2: 1150859-1157103 bp 3 RT 3: 2905256-2913632 bp Neighborhood of RT #1 [40172, 45446] Nape_like_AP-endo pyrE RVT-UG5 TAT_signal Peptidase_M15_2 Neighborhood of RT #2 [1150859, 1157111] VWA_CoxE VWA_CoxE YfmG Hrd RVT-DGRs YfmG DLH Neighborhood of RT #3 [2905256, 2913632] PleD PleD PRK11359 PRK10060 DsbA_FrnE_like RVT-UG14 COG2931 Feature: gene Location: 40172-40945 bp Ori: SNX58584.1 Feature: domain Description: Nape_like_AP-endo Location: 40175-40931 bp Feature: domain Description: Nape_like_AP-endo Location: 401 75-40931 bp Feature: gene Location: 40972-41616 bp Ori: SNX58585.1 Feature: domain Description: pyrE Location: 40984-41608 bp Feature: domain Description: pyrE Location: 40984-41 608 bp Feature: gene Location: 41741-43684 bp Ori: SNX58586.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 42206-42734 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 42206-42734 bp Feature: gene Location: 43696-44637 bp Feature: gene Location: 44853-45446 bp Ori: SNX58588.1 Feature: domain Description: TAT_signal Location: 44901-44970 bp Feature: domain Description: TAT_signal Location: 44901 -44970 bp Feature: domain Description: Peptidase_M15_2 Location: 45006-45438 bp Feature: domain Description: Peptidase_M1 5_2 Location: 45006-45438 bp Feature: gene Location: 1150859-1153504 bp Ori: SNX59644.1 Feature: domain Description: VWA_CoxE Location: 1151222-1151444 bp Feature: domain Description: VWA_CoxE Location: 1 1 51 222-1 1 51 444 bp Feature: domain Description: VWA_CoxE Location: 1151534-1151681 bp Feature: domain Description: VWA_CoxE Location: 1 1 51 534-1 1 51 681 bp Feature: domain Description: YfmG Location: 1152776-1153496 bp Feature: domain Description: YfmG Location: 1 1 52776-1 1 53496 bp Feature: gene Location: 1153668-1154177 bp Ori: SNX59645.1 Feature: domain Description: Hrd Location: 1153914-1154118 bp Feature: domain Description: Hrd Location: 1 1 5391 4-1 1 541 1 8 bp Feature: gene Location: 1154158-1155177 bp Ori: SNX59646.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1154368-1154959 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 54368-1 1 54959 bp Feature: gene Location: 1155488-1156303 bp Ori: SNX59647.1 Feature: domain Description: YfmG Location: 1155629-1156295 bp Feature: domain Description: YfmG Location: 1 1 55629-1 1 56295 bp Feature: gene Location: 1156398-1157111 bp Ori: SNX59648.1 Feature: domain Description: DLH Location: 1156446-1157103 bp Feature: domain Description: DLH Location: 1 1 56446-1 1 571 03 bp Feature: gene Location: 2905256-2908666 bp Ori: SNX61323.1 Feature: domain Description: PleD Location: 2905262-2905634 bp Feature: domain Description: PleD Location: 2905262-2905634 bp Feature: domain Description: PleD Location: 2905802-2906075 bp Feature: domain Description: PleD Location: 2905802-2906075 bp Feature: domain Description: PRK11359 Location: 2906153-2906936 bp Feature: domain Description: PRK1 1 359 Location: 29061 53-2906936 bp Feature: domain Description: PRK10060 Location: 2906948-2908619 bp Feature: domain Description: PRK1 0060 Location: 2906948-290861 9 bp Feature: gene Location: 2908650-2909288 bp Ori: SNX61324.1 Feature: domain Description: DsbA_FrnE_like Location: 2908674-2909211 bp Feature: domain Description: DsbA_FrnE_like Location: 2908674-290921 1 bp Feature: gene Location: 2909551-2911095 bp Ori: SNX61326.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2909980-2910466 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 2909980-291 0466 bp Feature: gene Location: 2911775-2912860 bp Ori: SNX61327.1 Feature: domain Description: COG2931 Location: 2911949-2912801 bp Feature: domain Description: COG2931 Location: 291 1 949-291 2801 bp Feature: gene Location: 2913123-2913632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nape_like_AP-endo (cd10281), pyrE (TIGR00336), RVT-UG5, TAT_signal (pfam10518), Peptidase_M15_2 (pfam05951), VWA_CoxE (pfam05762), YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs, DLH (pfam01738)
PleD (COG3706), PRK11359 (cyclic-di-GMP phosphodiesterase; Provisional), PRK10060 (cyclic di-GMP phosphodiesterase), DsbA_FrnE_like (cd03025), RVT-UG14, COG2931 (Ca2+-binding protein, RTX toxin-related )