myRT

myRT report for GCA_900215155.1_IMG-taxon_2617270900_annotated_assembly

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Seq: LT907980.1 (4436589 bp)
Overview 1 RT 1: 501361-505288 bp 2 RT 2: 947891-955668 bp 3 RT 3: 1465870-1471086 bp 4 RT 4: 1867849-1872241 bp 5 RT 5: 2605482-2615410 bp Neighborhood of RT #1 [501361, 505353] PRK09330 RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Neighborhood of RT #2 [947891, 955862] MPP_239FB RVT-G2L DUF45 COG0610 Neighborhood of RT #3 [1465870, 1471086] Phage_int_SAM_4 INT_IntI_C RVT-GII GIIM RhtB Neighborhood of RT #4 [1867849, 1872241] RVT-DGRs Neighborhood of RT #5 [2605482, 2615410] COG0610 DUF45 RVT-UG16 AAA_29 DUF3732 Feature: gene Location: 501361-501612 bp Feature: gene Location: 501875-502156 bp Ori: SOB74964.1 Feature: domain Description: PRK09330 Location: 501887-502097 bp Feature: domain Description: PRK09330 Location: 501 887-502097 bp Feature: gene Location: 502662-503249 bp Ori: SOB74965.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502866-503247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502866-503247 bp Feature: gene Location: 503367-504377 bp Ori: SOB74966.1 Feature: domain Description: Phage_int_SAM_1 Location: 503418-503655 bp Feature: domain Description: Phage_int_SAM_1 Location: 50341 8-503655 bp Feature: domain Description: INT_RitC_C_like Location: 503745-504294 bp Feature: domain Description: INT_RitC_C_like Location: 503745-504294 bp Feature: gene Location: 504364-505353 bp Ori: SOB74967.1 Feature: domain Description: INT_RitB_C_like Location: 504703-505288 bp Feature: domain Description: INT_RitB_C_like Location: 504703-505288 bp Feature: gene Location: 947891-948529 bp Ori: SOB75351.1 Feature: domain Description: MPP_239FB Location: 947897-948443 bp Feature: domain Description: MPP_239FB Location: 947897-948443 bp Feature: gene Location: 950166-950351 bp Feature: gene Location: 950577-951758 bp Ori: SOB75353.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 950799-951438 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 950799-951 438 bp Feature: gene Location: 951985-952713 bp Ori: SOB75354.1 Feature: domain Description: DUF45 Location: 952075-952693 bp Feature: domain Description: DUF45 Location: 952075-952693 bp Feature: gene Location: 952710-955862 bp Ori: SOB75355.1 Feature: domain Description: COG0610 Location: 952728-955668 bp Feature: domain Description: COG061 0 Location: 952728-955668 bp Feature: gene Location: 1465870-1466781 bp Ori: SOB75804.1 Feature: domain Description: Phage_int_SAM_4 Location: 1465906-1466146 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 465906-1 4661 46 bp Feature: domain Description: INT_IntI_C Location: 1466185-1466698 bp Feature: domain Description: INT_IntI_C Location: 1 4661 85-1 466698 bp Feature: gene Location: 1466934-1467353 bp Feature: gene Location: 1467431-1468765 bp Ori: SOB75806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1467710-1468328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46771 0-1 468328 bp Feature: domain Description: GIIM Note: maturase Location: 1468370-1468598 bp Feature: domain Description: GIIM Note: maturase Location: 1 468370-1 468598 bp Feature: gene Location: 1469413-1470048 bp Ori: SOB75807.1 Feature: domain Description: RhtB Location: 1469431-1470040 bp Feature: domain Description: RhtB Location: 1 469431 -1 470040 bp Feature: gene Location: 1470907-1471086 bp Feature: gene Location: 1867849-1868022 bp Feature: gene Location: 1868019-1868393 bp Feature: gene Location: 1868499-1871132 bp Ori: SOB76173.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1870164-1870788 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 8701 64-1 870788 bp Feature: gene Location: 1871074-1871298 bp Feature: gene Location: 1871333-1872241 bp Feature: gene Location: 2605482-2608814 bp Ori: SOB76833.1 Feature: domain Description: COG0610 Location: 2605503-2608482 bp Feature: domain Description: COG061 0 Location: 2605503-2608482 bp Feature: gene Location: 2608814-2609509 bp Ori: SOB76834.1 Feature: domain Description: DUF45 Location: 2608871-2609480 bp Feature: domain Description: DUF45 Location: 2608871 -2609480 bp Feature: gene Location: 2609569-2611068 bp Ori: SOB76835.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2609932-2610340 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 2609932-261 0340 bp Feature: gene Location: 2612973-2614931 bp Ori: SOB76836.1 Feature: domain Description: AAA_29 Location: 2612991-2613132 bp Feature: domain Description: AAA_29 Location: 261 2991 -261 31 32 bp Feature: domain Description: DUF3732 Location: 2614365-2614893 bp Feature: domain Description: DUF3732 Location: 261 4365-261 4893 bp Feature: gene Location: 2614928-2615410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09330 (cell division protein FtsZ; Validated), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), MPP_239FB (cd07379), RVT-G2L, DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), Phage_int_SAM_4 (pfam13495)
INT_IntI_C (cd01193), GIIM (pfam08388), RhtB (COG1280), RVT-DGRs, RVT-UG16, AAA_29 (pfam13555), DUF3732 (pfam12532)