myRT

myRT report for GCA_900230115.1_IMG-taxon_2634166896_annotated_assembly

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Seq: LT907983.1 (5461565 bp)
Overview 1 RT 1: 3291180-3295397 bp 2 RT 2: 4325575-4329060 bp 3 RT 3: 4957357-4960966 bp Neighborhood of RT #1 [3291180, 3295397] HTH_XRE RVT-Retrons COG3177 Neighborhood of RT #2 [4325575, 4329086] Cas1_I-II-III RVT-Retrons SAVED Neighborhood of RT #3 [4957357, 4960966] RVT-GII RVT-GII GIIM Feature: gene Location: 3291180-3291416 bp Feature: gene Location: 3291455-3291745 bp Feature: domain Description: HTH_XRE Location: 3291467-3291629 bp Feature: domain Description: HTH_XRE Location: 3291 467-3291 629 bp Feature: gene Location: 3291755-3292609 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3291926-3292442 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3291 926-3292442 bp Feature: gene Location: 3293303-3294601 bp Feature: domain Description: COG3177 Location: 3293606-3294542 bp Feature: domain Description: COG31 77 Location: 3293606-3294542 bp Feature: gene Location: 3294738-3295397 bp Feature: gene Location: 4325575-4326519 bp Feature: domain Description: Cas1_I-II-III Location: 4325647-4326490 bp Feature: domain Description: Cas1 _I-II-III Location: 4325647-4326490 bp Feature: gene Location: 4326445-4327167 bp Feature: gene Location: 4327167-4328144 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4327266-4327824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4327266-4327824 bp Feature: gene Location: 4328157-4328336 bp Feature: gene Location: 4328535-4329086 bp Feature: domain Description: SAVED Location: 4328673-4329060 bp Feature: domain Description: SAVED Location: 4328673-4329060 bp Feature: gene Location: 4957357-4957734 bp Feature: gene Location: 4957809-4957979 bp Feature: gene Location: 4958465-4958893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4958660-4958870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4958660-4958870 bp Feature: gene Location: 4959027-4959785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4959033-4959315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4959033-495931 5 bp Feature: domain Description: GIIM Note: maturase Location: 4959387-4959600 bp Feature: domain Description: GIIM Note: maturase Location: 4959387-4959600 bp Feature: gene Location: 4959892-4960401 bp Feature: gene Location: 4960637-4960966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, COG3177 (Fic family protein ), Cas1_I-II-III (cl00656), SAVED (pfam18145), RVT-GII, GIIM (pfam08388)